Detailed information of evm.model.Ap7.25 in Astrangia poculata

Genomic Location: Ap7:248380...256004
NR annotation: KAJ7369780.1, late secretory pathway protein avl9 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NBF6Late secretory pathway protein AVL9 homolog OS=Homo sapiens OX=9606 GN=AVL9 PE=1 SV=1
Q80U56Late secretory pathway protein AVL9 homolog OS=Mus musculus OX=10090 GN=Avl9 PE=1 SV=2
Q5R991Late secretory pathway protein AVL9 homolog OS=Pongo abelii OX=9601 GN=AVL9 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005417 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09794
all species →		Avl9Transport protein Avl9FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043153
all species →		Homologous_superfamilyDENN domain, C-terminal lobeInterproscan
IPR018307
all species →		DomainAVL9/DENND6 domainInterproscan
IPR051731
all species →		FamilyDENND11/AVL9 guanine nucleotide exchange factorsInterproscan
IPR037516
all species →		DomainTripartite DENN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31017
all species →		LATE SECRETORY PATHWAY PROTEIN AVL9-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.25.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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