Gene detail

Detailed information of evm.model.Ap7.2586 in Astrangia poculata

Genomic Location: Ap7:27310334...27323530
NR annotation: CAH3030633.1, unnamed protein product [Porites evermanni]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B2GUE2	Leucine-rich repeat flightless-interacting protein 2 OS=Xenopus tropicalis OX=8364 GN=lrrfip2 PE=2 SV=1
Q91WK0	Leucine-rich repeat flightless-interacting protein 2 OS=Mus musculus OX=10090 GN=Lrrfip2 PE=1 SV=1
Q2T9W6	Leucine-rich repeat flightless-interacting protein 2 OS=Bos taurus OX=9913 GN=LRRFIP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004819 (this species only)
Transcription factor family	LRRFIP · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09738 all species →	LRRFIP	LRRFIP family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019139 all species →	Family	Leucine-rich repeat flightless-interacting protein 1/2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19212 all species →	LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26434	LRRFIP; leucine-rich repeat flightless-interacting protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.