Detailed information of evm.model.Ap7.2609 in Astrangia poculata

Genomic Location: Ap7:27521314...27541648
NR annotation: XP_020608725.1, uncharacterized protein LOC110047322 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B5DFC9Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1
O88322Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2
Q14112Nidogen-2 OS=Homo sapiens OX=9606 GN=NID2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007143 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF00801
all species →		PKDPKD domainDomainInterproscan
PF12947
all species →		EGF_3EGF domainDomainInterproscan
PF07974
all species →		EGF_2EGF-like domainDomainInterproscan
PF00066
all species →		NotchLNR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR052235
all species →		FamilyNephronectin domain-containing proteinInterproscan
IPR035986
all species →		Homologous_superfamilyPKD domain superfamilyInterproscan
IPR000601
all species →		DomainPKD domainInterproscan
IPR000800
all species →		DomainNotch domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR024731
all species →		DomainEGF domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR022409
all species →		DomainPKD/Chitinase domainInterproscan
IPR013111
all species →		DomainEGF-like domain, extracellularInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24050
all species →		PA14 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.2609.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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