Gene detail

Detailed information of evm.model.Ap7.2759 in Astrangia poculata

Genomic Location: Ap7:29155747...29165788
NR annotation: XP_027052472.1, uncharacterized protein LOC113679705 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap7.2759

atgtcttcaaaccgacgagcgtcgtttccagtaaatgctcttcgtcgaagcccacgaaggagaacgaagactccatcggtgaatgagctgtcgaagaaatgcaaattaagtcccagagggaagagaagacttgaattccagcaagaaaaaccattaaaaggccgaacattttacttggatcttcaaggctatagaaaaatcagcagcttacaagccagaataaagggattaggaggggctatagaagaattcttgagcaaggacatcagttttgttgtcactaacaaaaaagatgcagacacacgttgttcaccacggagtaattccacaccaagccccatcttgtcagttccaagtccatttcctgggaatacaaaaagttcatcagcaaaaggctctgctgtgccatctccattgagtgccgactcatgtggtgccgagcaaacaggcccaactgtccccaagcatgacatgcgtggtaaagcactggcagcccaagcagctattacctacaagtatggaaccagcaacatcatggctaatgcaagaaactggggtgtgacgattgtaccgctagaaaagatgttagaaaagttggaaaagtatggaagtgttgaaaagaaaccaacatccaagccgttagtttctggacgggtggcaaaacagggtgtcaagcccaaagtgagaaaactctacgccccattcatcaaggtggaagatcacagtcgcgcttacaagccattggttcatgagttgaaggagtggccaaagattcattttgatggtccactgggtggttgcccttttgactcaccaaagaaagaattggagaatgaaaatcaggaacaggccaggactaaaagaaaagcaacccaagaggacaagaacaaaaagaaaggattttgtgagtgctgttgtattcattatgaggacttagacatgcaccttgtcagtgatcgtcaccagtcgtttgccagggactcgtccaactatcgaagcctggatgagctaatcaacaaaggaccaagcttgcaggatttcttggcaaaaatgttgttgaaacatgaacagaaggagaaagagaaacaggagaaagacaggggtgaatcgccaagtactggaaactcccttgtggatcgagacgaagaaaaaacgccaacaaaaaagaacagacatgaaacacttccaaactgtgagacgccacccaaacaaactccaacagactgccacacccccaccaacccctcccctgagaggagacgtgcgtttcgcacccccaccaacgactcctccccagagaaaaagtcaactgatgataacacaccaacaagattgctgagacgaagaggaggacaagctgcttgtgaggtcgagatggttgagacacgtcagttgcgtagcagtccaagactgtcaaattctctcaacgaaaggaagagccctcgcaaagttgttgacgctgcagaaggcaaaggagtcaaagggaagcgttggagtttagagaaaataagtgataaggcatctgtgaagcaaacgacccgcgccaaaacacaattaacttcatctagttcagtcggggagggtttgaaacgcggcaagggtgcctcctccccaacgcaagaagaattgtttcgccagtcttctaaaaacaagtctgcagaaggaatgaaaatgtcacccgtaaaaaatgtcgagaaaaagcacgcagatgtaaggacacgcgcacgtcaacaagattcctctgacgagagcagtggcaaagaaaatcacgatcccgaatcgcttgtagactgtcaatcaaaacagagaatggatactgacgaaaacgtgacaggttcaaggcttcgatctggagctacacgtgtcacgcaacaacatgctgatgtaggtaaagtcgaatctcatgctgatgcacaagaagagtctgatcaagacgtccatatggaaagtcctaaaaggacgagcctcagatcagctgcaaagggcaatagccctgaacactgcaatgaaagcgaacagcgggttgaatctcgtgaagctaatgtgcaagaaggtcccgagaaagatattcatatgaaaagtcctaaaagaacaagtcttagatctgctcgaaatgcgaatctcgctgagcgatgcagtgaaaagggccatggtgttgagtctcctaaagctcaagtgcaagaaaaacccgaacaagccattcaaatggaaagtcctaaaaggaagagtcttaggtctgctgcaaaggcgaatcttcctgaacgctacagtgaaaacgaggattgcgctgaaaattccaaacaagacatccatatggaaagtcctaaaagggcgagtctcagatccacggcaaaagcgaatctgtctgaacactgcagtgcaagcgaggaccgcgttgaatgtcctcgaggccgagtgcgagaagagctcgaacaggacatcgaaatggaagataagaacgtggaaagaaaagtgagatcgcgcgatcggtccttaactaccgcaaagcgtgagtcacaaaaaagcgctcgctcgtctgaagcagacacaggagaagctgctaaaatgacgaaggaacacgagacaagccaaggctcaaaaaactttcctcgtggctcagaagctgtccctgaagtggaagtcaagttgtcggattgtagacagttgtgcttgaccagtaacaggcctgtactagagaacgagtccgacgagtctgaaacagaaagcattcagttatcgagtggagaaacgttgtctaagaagtctttctctgacaacgcttcgacagatgggaaagatgaagacgatgacaatgatatctccagcactcccacgctggaaaactgtccttccccggcaagctcagagaagtcgggtttttccgacgaaacggcatcggccagaaagtatggcttgagaaaccgcacggaacaagaataccaggacccttgcctcggaaaaagaaccagatcaaaatgcaaaattcctgacgaggagtcgaagaaaggcaatcgggacgatcgccaacggagaaaaactgtttcatcgacatttactagcgtcaaagtgaaatccagaagtccaaaacaacggagtcagtcagtcataagccccaaaaggaaaacgccggaaaagaagctgaaaggcagcagagcgatgaaaagcccattaaataacactcctcgaagaaaggccccaaaacttaaagaccccacatctgagtccgattcaagcaccttctctggtagccctcgaagtgggcccatacgtgagacgagaggcacgcgcgcgtcaatgatgcattcagctgtccgcaacttggaagaagcggctgtcgagaacactgacaatgcaaaagagactttgtttttgtcagatagtgtcctctccttgggggacatctcaacgactgcagtttgcgggtcaccgtcccgtttgagacccgcagcgggcaaagataattcttcatcaggaattaaactcttggatgggagccctcacataaagaaagattttcattctgttacttttttagacaaacatcgtcagcagcgagctggtatcactcggttgtttgagtcggatgaagaggaggaggaagattttttgggcttcaatgtgccacattttgatcggtcattttcatctgaaggtgacctgagttataaaatccattccatcgtggagagtatgaaaggagatgacagtcaaggcactatagaagatgatgaaaataccacccttcacgaagataaagaagaggtcgaaatgatggaagatcttggacgtgagactgaagcagacattgaaagaagtgagatcaacaaagaaggacaatgcgtggagaaagatgttgaaatggatgtggagatcaaaaaggtggaagctacaagagtaacgaggaaaagaaaatctaatcagatcgacagtgtcgaggttaagagaagctactggtctgagtcccagggtgggttgccaagcagggctgaatcgtcttgcctggttgataacagtgatgatgatggcgacgattttgatgaagatgacgatgtgtttagcacagtggctgatagctctgacggagaagaagatgaacaggaagtgtcgtcaccatttagcattaccagctggagacggaagcggaaatctgaggaccttcaacctctggaagttgaaaggccaacgaaacgacgaaagtcacatgtggatgcagataccgacccctcctcccagagttccagaccagagactcctgtcaaaagtggagcaaatcgaggaatccgtgctcaaaaggatgacagaaaccagaaagcaacctgttttacgtcgaagcttgatgaattgctggacagcgaggaggaaaaaaaagcccaatcttcgctgtctgcacaagattctgatagtttctacgacagcgacaaacctgtgtatcaaacgatcgaggaacgcgtcaagcttcgacggattttgaacctctctcgaaaagaatatgaaaattctcgatcgctccgtcaaacccgggatcacggaaaacttgacaacacgcatatagcagcaaaagggaacaccgagggaagaaaaccaccactgaaaccgcttccaaaacaaacagttaaactgttaaagccgttgaaaaacgtttctccgattcgatcatcgtcaagactacgccgcactaacagctcaccgagttcaaacacatcaccactcgctactccttctgggaaaagccgcagagccacgtggatttatgacgtcaatgagtttgcgtccccaccttcagcagcgccaagatttggcggaaaccgtgtgacgtgttcaactcctgcttcaactattctttctcccaaacgtactttgaggccactgagacacgacaaaatggctgaagattccttgccgaggaaatcacgacaaagggacgtttttgcgtttgacgaatga

Transcript

evm.model.Ap7.2759

ATGTCTTCAAACCGACGAGCGTCGTTTCCAGTAAATGCTCTTCGTCGAAGCCCACGAAGGAGAACGAAGACTCCATCGGTGAATGAGCTGTCGAAGAAATGCAAATTAAGTCCCAGAGGGAAGAGAAGACTTGAATTCCAGCAAGAAAAACCATTAAAAGGCCGAACATTTTACTTGGATCTTCAAGGCTATAGAAAAATCAGCAGCTTACAAGCCAGAATAAAGGGATTAGGAGGGGCTATAGAAGAATTCTTGAGCAAGGACATCAGTTTTGTTGTCACTAACAAAAAAGATGCAGACACACGTTGTTCACCACGGAGTAATTCCACACCAAGCCCCATCTTGTCAGTTCCAAGTCCATTTCCTGGGAATACAAAAAGTTCATCAGCAAAAGGCTCTGCTGTGCCATCTCCATTGAGTGCCGACTCATGTGGTGCCGAGCAAACAGGCCCAACTGTCCCCAAGCATGACATGCGTGGTAAAGCACTGGCAGCCCAAGCAGCTATTACCTACAAGTATGGAACCAGCAACATCATGGCTAATGCAAGAAACTGGGGTGTGACGATTGTACCGCTAGAAAAGATGTTAGAAAAGTTGGAAAAGTATGGAAGTGTTGAAAAGAAACCAACATCCAAGCCGTTAGTTTCTGGACGGGTGGCAAAACAGGGTGTCAAGCCCAAAGTGAGAAAACTCTACGCCCCATTCATCAAGGTGGAAGATCACAGTCGCGCTTACAAGCCATTGGTTCATGAGTTGAAGGAGTGGCCAAAGATTCATTTTGATGGTCCACTGGGTGGTTGCCCTTTTGACTCACCAAAGAAAGAATTGGAGAATGAAAATCAGGAACAGGCCAGGACTAAAAGAAAAGCAACCCAAGAGGACAAGAACAAAAAGAAAGGATTTTGTGAGTGCTGTTGTATTCATTATGAGGACTTAGACATGCACCTTGTCAGTGATCGTCACCAGTCGTTTGCCAGGGACTCGTCCAACTATCGAAGCCTGGATGAGCTAATCAACAAAGGACCAAGCTTGCAGGATTTCTTGGCAAAAATGTTGTTGAAACATGAACAGAAGGAGAAAGAGAAACAGGAGAAAGACAGGGGTGAATCGCCAAGTACTGGAAACTCCCTTGTGGATCGAGACGAAGAAAAAACGCCAACAAAAAAGAACAGACATGAAACACTTCCAAACTGTGAGACGCCACCCAAACAAACTCCAACAGACTGCCACACCCCCACCAACCCCTCCCCTGAGAGGAGACGTGCGTTTCGCACCCCCACCAACGACTCCTCCCCAGAGAAAAAGTCAACTGATGATAACACACCAACAAGATTGCTGAGACGAAGAGGAGGACAAGCTGCTTGTGAGGTCGAGATGGTTGAGACACGTCAGTTGCGTAGCAGTCCAAGACTGTCAAATTCTCTCAACGAAAGGAAGAGCCCTCGCAAAGTTGTTGACGCTGCAGAAGGCAAAGGAGTCAAAGGGAAGCGTTGGAGTTTAGAGAAAATAAGTGATAAGGCATCTGTGAAGCAAACGACCCGCGCCAAAACACAATTAACTTCATCTAGTTCAGTCGGGGAGGGTTTGAAACGCGGCAAGGGTGCCTCCTCCCCAACGCAAGAAGAATTGTTTCGCCAGTCTTCTAAAAACAAGTCTGCAGAAGGAATGAAAATGTCACCCGTAAAAAATGTCGAGAAAAAGCACGCAGATGTAAGGACACGCGCACGTCAACAAGATTCCTCTGACGAGAGCAGTGGCAAAGAAAATCACGATCCCGAATCGCTTGTAGACTGTCAATCAAAACAGAGAATGGATACTGACGAAAACGTGACAGGTTCAAGGCTTCGATCTGGAGCTACACGTGTCACGCAACAACATGCTGATGTAGGTAAAGTCGAATCTCATGCTGATGCACAAGAAGAGTCTGATCAAGACGTCCATATGGAAAGTCCTAAAAGGACGAGCCTCAGATCAGCTGCAAAGGGCAATAGCCCTGAACACTGCAATGAAAGCGAACAGCGGGTTGAATCTCGTGAAGCTAATGTGCAAGAAGGTCCCGAGAAAGATATTCATATGAAAAGTCCTAAAAGAACAAGTCTTAGATCTGCTCGAAATGCGAATCTCGCTGAGCGATGCAGTGAAAAGGGCCATGGTGTTGAGTCTCCTAAAGCTCAAGTGCAAGAAAAACCCGAACAAGCCATTCAAATGGAAAGTCCTAAAAGGAAGAGTCTTAGGTCTGCTGCAAAGGCGAATCTTCCTGAACGCTACAGTGAAAACGAGGATTGCGCTGAAAATTCCAAACAAGACATCCATATGGAAAGTCCTAAAAGGGCGAGTCTCAGATCCACGGCAAAAGCGAATCTGTCTGAACACTGCAGTGCAAGCGAGGACCGCGTTGAATGTCCTCGAGGCCGAGTGCGAGAAGAGCTCGAACAGGACATCGAAATGGAAGATAAGAACGTGGAAAGAAAAGTGAGATCGCGCGATCGGTCCTTAACTACCGCAAAGCGTGAGTCACAAAAAAGCGCTCGCTCGTCTGAAGCAGACACAGGAGAAGCTGCTAAAATGACGAAGGAACACGAGACAAGCCAAGGCTCAAAAAACTTTCCTCGTGGCTCAGAAGCTGTCCCTGAAGTGGAAGTCAAGTTGTCGGATTGTAGACAGTTGTGCTTGACCAGTAACAGGCCTGTACTAGAGAACGAGTCCGACGAGTCTGAAACAGAAAGCATTCAGTTATCGAGTGGAGAAACGTTGTCTAAGAAGTCTTTCTCTGACAACGCTTCGACAGATGGGAAAGATGAAGACGATGACAATGATATCTCCAGCACTCCCACGCTGGAAAACTGTCCTTCCCCGGCAAGCTCAGAGAAGTCGGGTTTTTCCGACGAAACGGCATCGGCCAGAAAGTATGGCTTGAGAAACCGCACGGAACAAGAATACCAGGACCCTTGCCTCGGAAAAAGAACCAGATCAAAATGCAAAATTCCTGACGAGGAGTCGAAGAAAGGCAATCGGGACGATCGCCAACGGAGAAAAACTGTTTCATCGACATTTACTAGCGTCAAAGTGAAATCCAGAAGTCCAAAACAACGGAGTCAGTCAGTCATAAGCCCCAAAAGGAAAACGCCGGAAAAGAAGCTGAAAGGCAGCAGAGCGATGAAAAGCCCATTAAATAACACTCCTCGAAGAAAGGCCCCAAAACTTAAAGACCCCACATCTGAGTCCGATTCAAGCACCTTCTCTGGTAGCCCTCGAAGTGGGCCCATACGTGAGACGAGAGGCACGCGCGCGTCAATGATGCATTCAGCTGTCCGCAACTTGGAAGAAGCGGCTGTCGAGAACACTGACAATGCAAAAGAGACTTTGTTTTTGTCAGATAGTGTCCTCTCCTTGGGGGACATCTCAACGACTGCAGTTTGCGGGTCACCGTCCCGTTTGAGACCCGCAGCGGGCAAAGATAATTCTTCATCAGGAATTAAACTCTTGGATGGGAGCCCTCACATAAAGAAAGATTTTCATTCTGTTACTTTTTTAGACAAACATCGTCAGCAGCGAGCTGGTATCACTCGGTTGTTTGAGTCGGATGAAGAGGAGGAGGAAGATTTTTTGGGCTTCAATGTGCCACATTTTGATCGGTCATTTTCATCTGAAGGTGACCTGAGTTATAAAATCCATTCCATCGTGGAGAGTATGAAAGGAGATGACAGTCAAGGCACTATAGAAGATGATGAAAATACCACCCTTCACGAAGATAAAGAAGAGGTCGAAATGATGGAAGATCTTGGACGTGAGACTGAAGCAGACATTGAAAGAAGTGAGATCAACAAAGAAGGACAATGCGTGGAGAAAGATGTTGAAATGGATGTGGAGATCAAAAAGGTGGAAGCTACAAGAGTAACGAGGAAAAGAAAATCTAATCAGATCGACAGTGTCGAGGTTAAGAGAAGCTACTGGTCTGAGTCCCAGGGTGGGTTGCCAAGCAGGGCTGAATCGTCTTGCCTGGTTGATAACAGTGATGATGATGGCGACGATTTTGATGAAGATGACGATGTGTTTAGCACAGTGGCTGATAGCTCTGACGGAGAAGAAGATGAACAGGAAGTGTCGTCACCATTTAGCATTACCAGCTGGAGACGGAAGCGGAAATCTGAGGACCTTCAACCTCTGGAAGTTGAAAGGCCAACGAAACGACGAAAGTCACATGTGGATGCAGATACCGACCCCTCCTCCCAGAGTTCCAGACCAGAGACTCCTGTCAAAAGTGGAGCAAATCGAGGAATCCGTGCTCAAAAGGATGACAGAAACCAGAAAGCAACCTGTTTTACGTCGAAGCTTGATGAATTGCTGGACAGCGAGGAGGAAAAAAAAGCCCAATCTTCGCTGTCTGCACAAGATTCTGATAGTTTCTACGACAGCGACAAACCTGTGTATCAAACGATCGAGGAACGCGTCAAGCTTCGACGGATTTTGAACCTCTCTCGAAAAGAATATGAAAATTCTCGATCGCTCCGTCAAACCCGGGATCACGGAAAACTTGACAACACGCATATAGCAGCAAAAGGGAACACCGAGGGAAGAAAACCACCACTGAAACCGCTTCCAAAACAAACAGTTAAACTGTTAAAGCCGTTGAAAAACGTTTCTCCGATTCGATCATCGTCAAGACTACGCCGCACTAACAGCTCACCGAGTTCAAACACATCACCACTCGCTACTCCTTCTGGGAAAAGCCGCAGAGCCACGTGGATTTATGACGTCAATGAGTTTGCGTCCCCACCTTCAGCAGCGCCAAGATTTGGCGGAAACCGTGTGACGTGTTCAACTCCTGCTTCAACTATTCTTTCTCCCAAACGTACTTTGAGGCCACTGAGACACGACAAAATGGCTGAAGATTCCTTGCCGAGGAAATCACGACAAAGGGACGTTTTTGCGTTTGACGAATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9QZ41	Protein DBF4 homolog A OS=Mus musculus OX=10090 GN=Dbf4 PE=1 SV=1
Q8NFT6	Protein DBF4 homolog B OS=Homo sapiens OX=9606 GN=DBF4B PE=1 SV=1
Q99MU0	Protein DBF4 homolog A OS=Cricetulus griseus OX=10029 GN=DBF4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001489 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07535 all species →	zf-DBF	DBF zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006572 all species →	Domain	Zinc finger, DBF-type	Interproscan
IPR051590 all species →	Family	DNA Replication Regulatory Kinase Subunit	Interproscan
IPR038545 all species →	Homologous_superfamily	DBF-type zinc finger superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15375 all species →	ACTIVATOR OF S-PHASE KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0010571 all species →	Biological Process	positive regulation of nuclear cell cycle DNA replication	Interproscan
GO:0031431 all species →	Cellular Component	Dbf4-dependent protein kinase complex	Interproscan
GO:0043539 all species →	Molecular Function	protein serine/threonine kinase activator activity	Interproscan
GO:1901987 all species →	Biological Process	regulation of cell cycle phase transition	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap7.2759.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.