Detailed information of evm.model.Ap7.2819 in Astrangia poculata

Genomic Location: Ap7:29733073...29736388
NR annotation: XP_022803610.1, protein RFT1 homolog [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0D2E8Man(5)GlcNAc(2)-PP-dolichol translocation protein RFT1 OS=Xenopus tropicalis OX=8364 GN=rft1 PE=2 SV=1
Q96AA3Man(5)GlcNAc(2)-PP-dolichol translocation protein RFT1 OS=Homo sapiens OX=9606 GN=RFT1 PE=1 SV=1
Q8C3B8Man(5)GlcNAc(2)-PP-dolichol translocation protein RFT1 OS=Mus musculus OX=10090 GN=Rft1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007435 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04506
all species →		Rft-1Rft proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007594
all species →		FamilyRFT1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13117
all species →		ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006488
all species →		Biological Processdolichol-linked oligosaccharide biosynthetic processInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0034203
all species →		Biological Processglycolipid translocationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06316RFT1; oligosaccharide translocation protein RFT1-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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