Detailed information of evm.model.Ap7.2850 in Astrangia poculata

Genomic Location: Ap7:30059018...30062500
NR annotation: XP_020625031.1, estradiol 17-beta-dehydrogenase 8-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6MGB5(3R)-3-hydroxyacyl-CoA dehydrogenase OS=Rattus norvegicus OX=10116 GN=Hsd17b8 PE=1 SV=1
P50171(3R)-3-hydroxyacyl-CoA dehydrogenase OS=Mus musculus OX=10090 GN=Hsd17b8 PE=1 SV=2
Q92506(3R)-3-hydroxyacyl-CoA dehydrogenase OS=Homo sapiens OX=9606 GN=HSD17B8 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001953 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13561
all species →		adh_short_C2Enoyl-(Acyl carrier protein) reductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24321
all species →		DEHYDROGENASES, SHORT CHAINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap7.2850. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13370HSD17B8; 17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) / 3-oxoacyl-[acyl-carrier protein] reductase alpha subunitEC:1.1.1.62
EC:1.1.1.239
Steroid hormone biosynthesisko00140deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP