Detailed information of evm.model.Ap7.2884 in Astrangia poculata

Genomic Location: Ap7:30462364...30469872
NR annotation: XP_020616356.1, rho-related protein racA-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P34147Rho-related protein racA OS=Dictyostelium discoideum OX=44689 GN=racA PE=1 SV=2
O94844Rho-related BTB domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RHOBTB1 PE=1 SV=2
Q9BYZ6Rho-related BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RHOBTB2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002834 (this species only)
Transcription factor familyZBTB · all TF in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|BTB · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →		RasRas familyDomainInterproscan
PF00651
all species →		BTBBTB/POZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011333
all species →		Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR005225
all species →		DomainSmall GTP-binding protein domainInterproscan
IPR001806
all species →		FamilySmall GTPaseInterproscan
IPR000210
all species →		DomainBTB/POZ domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24413
all species →		SPECKLE-TYPE POZ PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0030162
all species →		Biological Processregulation of proteolysisInterproscan
GO:0031625
all species →		Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.2884.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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