Detailed information of evm.model.Ap7.2896 in Astrangia poculata

Genomic Location: Ap7:30597344...30599609
NR annotation: XP_020616360.1, homeobox protein Hox-C6-like isoform X2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9TT89Homeobox protein Hox-B7 OS=Bos taurus OX=9913 GN=HOXB7 PE=2 SV=1
A1YFA5Homeobox protein Hox-B7 OS=Gorilla gorilla gorilla OX=9595 GN=HOXB7 PE=3 SV=1
P09629Homeobox protein Hox-B7 OS=Homo sapiens OX=9606 GN=HOXB7 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000082 (this species only)
Transcription factor familyHomeobox · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020479
all species →		DomainHomeobox domain, metazoaInterproscan
IPR000047
all species →		Conserved_siteHelix-turn-helix motifInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR017970
all species →		Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45664
all species →		PROTEIN ZERKNUELLT 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.2896.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP