Genomic Location: Ap7:4415012...4419910
NR annotation: CAH3157534.1, unnamed protein product [Porites evermanni]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap7.371 |
| Transcript |
| evm.model.Ap7.371 |
| Protein |
| evm.model.Ap7.371 |
| UniProt accession | Description |
|---|---|
| Q60HE9 | Lysosomal alpha-mannosidase OS=Macaca fascicularis OX=9541 GN=MAN2B1 PE=2 SV=1 |
| O00754 | Lysosomal alpha-mannosidase OS=Homo sapiens OX=9606 GN=MAN2B1 PE=1 SV=3 |
| Q29451 | Lysosomal alpha-mannosidase OS=Bos taurus OX=9913 GN=MAN2B1 PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002052 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01074 all species → | Glyco_hydro_38N | Glycosyl hydrolases family 38 N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027291 all species → | Homologous_superfamily | Glycoside hydrolase 38, N-terminal domain superfamily | Interproscan |
| IPR011330 all species → | Homologous_superfamily | Glycoside hydrolase/deacetylase, beta/alpha-barrel | Interproscan |
| IPR000602 all species → | Domain | Glycoside hydrolase family 38, N-terminal domain | Interproscan |
| IPR050843 all species → | Family | Glycosyl Hydrolase Family 38 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11607 all species → | ALPHA-MANNOSIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005975 all species → | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0004559 all species → | Molecular Function | alpha-mannosidase activity | Interproscan |
| GO:0006013 all species → | Biological Process | mannose metabolic process | Interproscan |
| GO:0005764 all species → | Cellular Component | lysosome | Interproscan |
evm.model.Ap7.371.Transcript abundance of evm.model.Ap7.371 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
