Genomic Location: Ap7:5557136...5576487
NR annotation: XP_027057355.1, unconventional myosin-X-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap7.457 |
| Transcript |
| evm.model.Ap7.457 |
| Protein |
| evm.model.Ap7.457 |
| UniProt accession | Description |
|---|---|
| F8VQB6 | Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1 |
| D3ZJP6 | Unconventional myosin-X OS=Rattus norvegicus OX=10116 GN=Myo10 PE=1 SV=1 |
| Q9HD67 | Unconventional myosin-X OS=Homo sapiens OX=9606 GN=MYO10 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002873 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00063 all species → | Myosin_head | Myosin head (motor domain) | Domain | Interproscan |
| PF18597 all species → | SH3_19 | Myosin X N-terminal SH3 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001609 all species → | Domain | Myosin head, motor domain | Interproscan |
| IPR051724 all species → | Family | Actin-based Motor Myosin | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036961 all species → | Homologous_superfamily | Kinesin motor domain superfamily | Interproscan |
| IPR040640 all species → | Domain | Myosin X, N-terminal SH3 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46049 all species → | AGAP003327-PA | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003774 all species → | Molecular Function | cytoskeletal motor activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0016459 all species → | Cellular Component | myosin complex | Interproscan |
evm.model.Ap7.457.Transcript abundance of evm.model.Ap7.457 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
