Detailed information of evm.model.Ap7.470 in Astrangia poculata

Genomic Location: Ap7:5727498...5730356
NR annotation: XP_020629430.1, spondin-1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q69ZU6Thrombospondin type-1 domain-containing protein 7A OS=Mus musculus OX=10090 GN=Thsd7a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001175 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19028
all species →		TSP1_spondinSpondin-like TSP1 domainDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR051418
all species →		FamilySpondin/Thrombospondin type-1 domain-containingInterproscan
IPR044004
all species →		DomainSpondin-like TSP1 domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11311
all species →		SPONDINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap7.470. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.470.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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