Detailed information of evm.model.Ap7.580 in Astrangia poculata

Genomic Location: Ap7:6712989...6724248
NR annotation: XP_015770988.1, PREDICTED: 2-hydroxyacyl-CoA lyase 1-like [Acropora digitifera]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8CHM72-hydroxyacyl-CoA lyase 1 OS=Rattus norvegicus OX=10116 GN=Hacl1 PE=1 SV=1
Q9QXE02-hydroxyacyl-CoA lyase 1 OS=Mus musculus OX=10090 GN=Hacl1 PE=1 SV=2
Q9UJ832-hydroxyacyl-CoA lyase 1 OS=Homo sapiens OX=9606 GN=HACL1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003527 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02776
all species →		TPP_enzyme_NThiamine pyrophosphate enzyme, N-terminal TPP binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012001
all species →		DomainThiamine pyrophosphate enzyme, N-terminal TPP-binding domainInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR045025
all species →		FamilyTPP-binding domain containing protein HACL1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43710
all species →		2-HYDROXYACYL-COA LYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030976
all species →		Molecular Functionthiamine pyrophosphate bindingInterproscan
GO:0001561
all species →		Biological Processfatty acid alpha-oxidationInterproscan
GO:0005777
all species →		Cellular ComponentperoxisomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.580.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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