Detailed information of evm.model.Ap7.687 in Astrangia poculata

Genomic Location: Ap7:7779459...7784695
NR annotation: XP_020627560.1, programmed cell death 6-interacting protein-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9WU78Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3
Q9QZA2Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2
Q8WUM4Programmed cell death 6-interacting protein OS=Homo sapiens OX=9606 GN=PDCD6IP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004844 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13949
all species →		ALIX_LYPXL_bndALIX V-shaped domain binding to HIV DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045251
all species →		FamilyVacuolar protein-sorting protein Bro1-likeInterproscan
IPR025304
all species →		DomainALIX V-shaped domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23030
all species →		PCD6 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000281
all species →		Biological Processmitotic cytokinesisInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0071985
all species →		Biological Processmultivesicular body sorting pathwayInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.687.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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