Detailed information of evm.model.Ap7.787 in Astrangia poculata

Genomic Location: Ap7:8650265...8664988
NR annotation: XP_027056304.1, uncharacterized protein LOC113683279 isoform X1 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P80193Gamma-butyrobetaine dioxygenase OS=Pseudomonas sp. (strain AK-1) OX=29440 PE=1 SV=1
Q924Y0Gamma-butyrobetaine dioxygenase OS=Mus musculus OX=10090 GN=Bbox1 PE=1 SV=1
A5DCB6Trimethyllysine dioxygenase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PGUG_00921 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005841 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06155
all species →		GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan
PF02668
all species →		TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050411
all species →		FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR010376
all species →		DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan
IPR042098
all species →		Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR038492
all species →		Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan
IPR003819
all species →		DomainTauD/TfdA-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696
all species →		GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0045329
all species →		Biological Processcarnitine biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.787.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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