Detailed information of evm.model.Ap7.88 in Astrangia poculata

Genomic Location: Ap7:824167...829891
NR annotation: CAH3171895.1, unnamed protein product [Porites lobata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6IPG1Elongation factor 1-beta OS=Rattus norvegicus OX=10116 GN=Eef1b2 PE=1 SV=1
P34826Elongation factor 1-beta OS=Oryctolagus cuniculus OX=9986 GN=EEF1B PE=1 SV=2
Q5E983Elongation factor 1-beta OS=Bos taurus OX=9913 GN=EEF1B PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001854 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10587
all species →		EF-1_beta_acidEukaryotic elongation factor 1 beta central acidic regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049720
all species →		FamilyTranslation elongation factor EF1B, beta/delta subunitInterproscan
IPR014717
all species →		Homologous_superfamilyTranslation elongation factor EF1B/small ribosomal subunit protein bS6Interproscan
IPR001326
all species →		Conserved_siteTranslation elongation factor EF1B, beta/delta chains, conserved siteInterproscan
IPR036282
all species →		Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR018940
all species →		DomainElongation factor 1 beta central acidic region, eukaryoteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11595
all species →		EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003746
all species →		Molecular Functiontranslation elongation factor activityInterproscan
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0005853
all species →		Cellular Componenteukaryotic translation elongation factor 1 complexInterproscan
GO:0006414
all species →		Biological Processtranslational elongationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.88.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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