Genomic Location: Ap7:10633047...10661288
NR annotation: XP_020621180.1, LOW QUALITY PROTEIN: uncharacterized protein LOC110058860 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap7.954 |
| Transcript |
| evm.model.Ap7.954 |
| Protein |
| evm.model.Ap7.954 |
| UniProt accession | Description |
|---|---|
| Q14674 | Separin OS=Homo sapiens OX=9606 GN=ESPL1 PE=1 SV=3 |
| P60330 | Separin OS=Mus musculus OX=10090 GN=Espl1 PE=1 SV=1 |
| P33144 | Separin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bimB PE=4 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002281 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03568 all species → | Peptidase_C50 | Peptidase family C50 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR005314 all species → | Family | Peptidase C50, separase | Interproscan |
| IPR030397 all species → | Domain | SEPARIN core domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12792 all species → | EXTRA SPINDLE POLES 1-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0004197 all species → | Molecular Function | cysteine-type endopeptidase activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005813 all species → | Cellular Component | centrosome | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0051307 all species → | Biological Process | meiotic chromosome separation | Interproscan |
| GO:0072686 all species → | Cellular Component | mitotic spindle | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02365 | ESP1; separase | EC:3.4.22.49 | Chromosome and associated proteins | ko03036 | deepkoala |
Transcript abundance of evm.model.Ap7.954 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
