Gene detail

Detailed information of evm.model.Ap7.981 in Astrangia poculata

Genomic Location: Ap7:10923761...10933424
NR annotation: XP_022788751.1, rhodopsin-like [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap7.981

atgccgctatccggcatcgttcttatcatagggatattactgggtattactacattaattggtatcatcggcaatatctctgtgtgtctcgtggtgttttggaatcgctcaatgaggaatcaacttcatctgttgttggtgaacttagccattgctgatgtcgggatgtcagcttcctgcatgccctttgccgtcgctactgtgctattccatgaacagactattggtaaagccttctgttatttcaatggtttcatcaacacgctcttcgcaatggccagcgtgctcacaatctgctgtttgtgtgtgtaccagtacgtctcagttgtgctaccaatgaacaaatccctcaccaactttcggtgtctcgttatggtgctttgcgcatggattatttcgttcttcttcgcctctgggcccgcgatacattggggccgctacgagttcacctcaaacattttcaactgcgagtattatcacaccacgagcagagcggagatttcctacaacgtaactatgatgttttgtggatacatctttccttgtacttttatgattttcgcttatgtcagcattttaagagcgctgcacaaacatcaatcgcgcatggcagtcacgtcatctatatcaccagcgccggtcgcaggcgcacccgttaccttggaaacgaaattgcgcatgacaatgtcagttgttattttgacgtttcttgtttgtcggactccgttttttgtatttttgattcttacgaccaaagatttagaacacccgcccgattttctcggacagttgtctttttgggcgatttatttacacagcgcgtgcgatccgttcatctacgcctttaaacacacagaatatcaggacactttgaaagatatagttagaacatttcgcttggcactcatagaacagccgcgtatttcatcaagccggatatctggcgttaacaatgaagaaaaagatatgtggtcagacccgttcatcgacgaagtgaatgcagaactttcgcaagtaaacttctcaacttcatatcaactctttgggagtcttggcgaacaacagccacagaattacatcacagaccaagctatgcagcaaccaccagactgtaatatgctgccgcctcagccttactatccataccaggcttggagtaattcaaatgaacagaacgaacaaatggactattcatatgatgagggcgcgtctggttgctcagtgatgtggcatgtacaaggagattatgacgagcagacatattctacagctcagccgcagtatatgaattcaaacgctggtgtaaactgcacatttgagagcaaaagcgtggttgttgccaaaattcagggtttacgttcagaaaacgtgacactggatgaggaaattgaagagcaaaatcggagaaacagcttgcttatgaagcagatcgcagacgccagggcacaattgaacatgatggaactaaacacagcgaatctctacaacgaataccacgccttgggcgagacatcggatagattctccaagcagcttgatcaagaggaaaagaagttgaaagagacagcttccgagaagcaagcggaaattttagagattaaagttgaggccgagatggtaccaacccttagagaagacagagatcgggtcgccgccgagatagcgcagctgcgcaacgacctcgaagatgctgaaattgacgtcagtaatatgacggagaaatttcagtatgaactcgggatcatggttttgtttcccttttggaaactggaagaggaaatggacagattactcaccgaggcacatttcagagttgatgaaggcggcgaagaacgtgatgttggtgatggctacgatagtgaagaacaaaagtctacatcaagctcaaatgacagctcgagagaaagcttggaagaaaacttcgaagaaaacccagccgacaactcagaggaaaacactggggaaagagccgaaagatcatcgactacatcagagaaaggctctttcaaccatgtcgaccatgagtctataccaagtgtatctgcctccagttctctcactgtcgacaaatctggcgtgaagactggtttcgactctgttggcttcattgaagatgagtcatttactcaacatgatgcagcaaagaaacagaaaaagaaaatcagcaaactcactcgccttggccgttggttacggcgcttgtgttgtataccacaaggaagaaaggatgaataa

Transcript

evm.model.Ap7.981

ATGCCGCTATCCGGCATCGTTCTTATCATAGGGATATTACTGGGTATTACTACATTAATTGGTATCATCGGCAATATCTCTGTGTGTCTCGTGGTGTTTTGGAATCGCTCAATGAGGAATCAACTTCATCTGTTGTTGGTGAACTTAGCCATTGCTGATGTCGGGATGTCAGCTTCCTGCATGCCCTTTGCCGTCGCTACTGTGCTATTCCATGAACAGACTATTGGTAAAGCCTTCTGTTATTTCAATGGTTTCATCAACACGCTCTTCGCAATGGCCAGCGTGCTCACAATCTGCTGTTTGTGTGTGTACCAGTACGTCTCAGTTGTGCTACCAATGAACAAATCCCTCACCAACTTTCGGTGTCTCGTTATGGTGCTTTGCGCATGGATTATTTCGTTCTTCTTCGCCTCTGGGCCCGCGATACATTGGGGCCGCTACGAGTTCACCTCAAACATTTTCAACTGCGAGTATTATCACACCACGAGCAGAGCGGAGATTTCCTACAACGTAACTATGATGTTTTGTGGATACATCTTTCCTTGTACTTTTATGATTTTCGCTTATGTCAGCATTTTAAGAGCGCTGCACAAACATCAATCGCGCATGGCAGTCACGTCATCTATATCACCAGCGCCGGTCGCAGGCGCACCCGTTACCTTGGAAACGAAATTGCGCATGACAATGTCAGTTGTTATTTTGACGTTTCTTGTTTGTCGGACTCCGTTTTTTGTATTTTTGATTCTTACGACCAAAGATTTAGAACACCCGCCCGATTTTCTCGGACAGTTGTCTTTTTGGGCGATTTATTTACACAGCGCGTGCGATCCGTTCATCTACGCCTTTAAACACACAGAATATCAGGACACTTTGAAAGATATAGTTAGAACATTTCGCTTGGCACTCATAGAACAGCCGCGTATTTCATCAAGCCGGATATCTGGCGTTAACAATGAAGAAAAAGATATGTGGTCAGACCCGTTCATCGACGAAGTGAATGCAGAACTTTCGCAAGTAAACTTCTCAACTTCATATCAACTCTTTGGGAGTCTTGGCGAACAACAGCCACAGAATTACATCACAGACCAAGCTATGCAGCAACCACCAGACTGTAATATGCTGCCGCCTCAGCCTTACTATCCATACCAGGCTTGGAGTAATTCAAATGAACAGAACGAACAAATGGACTATTCATATGATGAGGGCGCGTCTGGTTGCTCAGTGATGTGGCATGTACAAGGAGATTATGACGAGCAGACATATTCTACAGCTCAGCCGCAGTATATGAATTCAAACGCTGGTGTAAACTGCACATTTGAGAGCAAAAGCGTGGTTGTTGCCAAAATTCAGGGTTTACGTTCAGAAAACGTGACACTGGATGAGGAAATTGAAGAGCAAAATCGGAGAAACAGCTTGCTTATGAAGCAGATCGCAGACGCCAGGGCACAATTGAACATGATGGAACTAAACACAGCGAATCTCTACAACGAATACCACGCCTTGGGCGAGACATCGGATAGATTCTCCAAGCAGCTTGATCAAGAGGAAAAGAAGTTGAAAGAGACAGCTTCCGAGAAGCAAGCGGAAATTTTAGAGATTAAAGTTGAGGCCGAGATGGTACCAACCCTTAGAGAAGACAGAGATCGGGTCGCCGCCGAGATAGCGCAGCTGCGCAACGACCTCGAAGATGCTGAAATTGACGTCAGTAATATGACGGAGAAATTTCAGTATGAACTCGGGATCATGGTTTTGTTTCCCTTTTGGAAACTGGAAGAGGAAATGGACAGATTACTCACCGAGGCACATTTCAGAGTTGATGAAGGCGGCGAAGAACGTGATGTTGGTGATGGCTACGATAGTGAAGAACAAAAGTCTACATCAAGCTCAAATGACAGCTCGAGAGAAAGCTTGGAAGAAAACTTCGAAGAAAACCCAGCCGACAACTCAGAGGAAAACACTGGGGAAAGAGCCGAAAGATCATCGACTACATCAGAGAAAGGCTCTTTCAACCATGTCGACCATGAGTCTATACCAAGTGTATCTGCCTCCAGTTCTCTCACTGTCGACAAATCTGGCGTGAAGACTGGTTTCGACTCTGTTGGCTTCATTGAAGATGAGTCATTTACTCAACATGATGCAGCAAAGAAACAGAAAAAGAAAATCAGCAAACTCACTCGCCTTGGCCGTTGGTTACGGCGCTTGTGTTGTATACCACAAGGAAGAAAGGATGAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P18130	Alpha-1A adrenergic receptor OS=Bos taurus OX=9913 GN=ADRA1A PE=2 SV=1
O02824	Alpha-1A adrenergic receptor OS=Oryctolagus cuniculus OX=9986 GN=ADRA1A PE=2 SV=1
Q9WU25	Alpha-1A adrenergic receptor OS=Cavia porcellus OX=10141 GN=ADRA1A PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000811 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR051880 all species →	Family	G-protein Coupled Orphan Receptors	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24245 all species →	G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08437	GPR153; G protein-coupled receptor 153	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.