Detailed information of evm.model.Ap8.1132 in Astrangia poculata

Genomic Location: Ap8:12463595...12514891
NR annotation: XP_022785095.1, UDP-glucose:glycoprotein glucosyltransferase 1-like [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P5E4UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4
Q9NYU2UDP-glucose:glycoprotein glucosyltransferase 1 OS=Homo sapiens OX=9606 GN=UGGT1 PE=1 SV=3
Q9JLA3UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003105 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18402
all species →		Thioredoxin_14Thioredoxin-like domainDomainInterproscan
PF18404
all species →		Glyco_transf_24Glucosyltransferase 24DomainInterproscan
PF18400
all species →		Thioredoxin_12Thioredoxin-like domainDomainInterproscan
PF18403
all species →		Thioredoxin_15Thioredoxin-like domainDomainInterproscan
PF18401
all species →		Thioredoxin_13Thioredoxin-like domainDomainInterproscan
PF06427
all species →		UDP-g_GGTaseUDP-glucose:Glycoprotein GlucosyltransferaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029044
all species →		Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR040692
all species →		DomainUGGT, thioredoxin-like domain 3Interproscan
IPR040497
all species →		DomainGlucosyltransferase 24, catalytic domainInterproscan
IPR040693
all species →		DomainUGGT, thioredoxin-like domain 1Interproscan
IPR009448
all species →		FamilyUDP-glucose:Glycoprotein GlucosyltransferaseInterproscan
IPR040525
all species →		DomainUDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4Interproscan
IPR040694
all species →		DomainUGGT, thioredoxin-like domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11226
all species →		UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003980
all species →		Molecular FunctionUDP-glucose:glycoprotein glucosyltransferase activityInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0006486
all species →		Biological Processprotein glycosylationInterproscan
GO:0018279
all species →		Biological Processprotein N-linked glycosylation via asparagineInterproscan
GO:0051082
all species →		Molecular Functionunfolded protein bindingInterproscan
GO:0071712
all species →		Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11718HUGT; UDP-glucose:glycoprotein glucosyltransferaseEC:2.4.1.-
Glycosyltransferasesko01003deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap8.1132 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples
0TPM > 0
4Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole organism · cold control 14 0 0.00 0.00
whole organism · heat control 12 0 0.00 0.00
whole organism · cold challenge 12 0 0.00 0.00
whole organism · heat challenge 11 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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