Detailed information of evm.model.Ap8.1171 in Astrangia poculata

Genomic Location: Ap8:12951966...12962589
NR annotation: KAJ7390272.1, hypothetical protein OS493_026147 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P29241ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase OS=Aplysia californica OX=6500 PE=1 SV=1
Q27312ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase OS=Aplysia kurodai OX=6501 PE=1 SV=1
Q9MZ03ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Oryctolagus cuniculus OX=9986 GN=CD38 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001254 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02267
all species →
Rib_hydrolayseADP-ribosyl cyclaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003193
all species →
FamilyADP-ribosyl cyclase (CD38/157)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10912
all species →
ADP-RIBOSYL CYCLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003953
all species →
Molecular FunctionNAD+ nucleosidase activityInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0016849
all species →
Molecular Functionphosphorus-oxygen lyase activityInterproscan
GO:0030890
all species →
Biological Processpositive regulation of B cell proliferationInterproscan
GO:0061809
all species →
Molecular FunctionNAD+ nucleotidase, cyclic ADP-ribose generatingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.1171.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap8.1171 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples
0TPM > 0
4Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole organism · cold control 14 0 0.00 0.00
whole organism · heat control 12 0 0.00 0.00
whole organism · cold challenge 12 0 0.00 0.00
whole organism · heat challenge 11 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

TOP