Detailed information of evm.model.Ap8.1361 in Astrangia poculata

Genomic Location: Ap8:15280189...15289591
NR annotation: PFX13833.1, Hemicentin-1 [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q98892Opioid-binding protein/cell adhesion molecule homolog OS=Gallus gallus OX=9031 GN=OPCML PE=1 SV=2
Q69Z26Contactin-4 OS=Mus musculus OX=10090 GN=Cntn4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001165 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF07686
all species →		V-setImmunoglobulin V-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR050831
all species →		FamilyCarcinoembryonic antigen-related cell adhesionInterproscan
IPR013106
all species →		DomainImmunoglobulin V-set domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44427
all species →		CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap8.1361. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.1361.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP