Detailed information of evm.model.Ap8.1440 in Astrangia poculata

Genomic Location: Ap8:16139890...16146649
NR annotation: XP_020617972.1, hemicentin-1-like isoform X3 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6AZB0Brother of CDO OS=Mus musculus OX=10090 GN=Boc PE=1 SV=2
Q9BWV1Brother of CDO OS=Homo sapiens OX=9606 GN=BOC PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000023 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13895
all species →		Ig_2Immunoglobulin domainDomainInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR050831
all species →		FamilyCarcinoembryonic antigen-related cell adhesionInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44427
all species →		CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap8.1440. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.1440.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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