Detailed information of evm.model.Ap8.1499 in Astrangia poculata

Genomic Location: Ap8:16925973...16927559
NR annotation: XP_044173963.1, uncharacterized protein LOC122957698 [Acropora millepora]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
Q9UR07Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000010 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665
all species →		rveIntegrase core domainDomainInterproscan
PF17921
all species →		Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001584
all species →		DomainIntegrase, catalytic coreInterproscan
IPR041588
all species →		DomainIntegrase zinc-binding domainInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46888
all species →		ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.1499.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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