Gene detail

Detailed information of evm.model.Ap8.178 in Astrangia poculata

Genomic Location: Ap8:1752843...1755443
NR annotation: XP_020603196.1, cytochrome b-c1 complex subunit 6, mitochondrial-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P99028	Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrh PE=1 SV=2
P07919	Cytochrome b-c1 complex subunit 6, mitochondrial OS=Homo sapiens OX=9606 GN=UQCRH PE=1 SV=2
Q5M9I5	Cytochrome b-c1 complex subunit 6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrh PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009046 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02320 all species →	UCR_hinge	Ubiquinol-cytochrome C reductase hinge protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003422 all species →	Family	Cytochrome b-c1 complex, subunit 6	Interproscan
IPR023184 all species →	Domain	Ubiquinol-cytochrome C reductase hinge domain	Interproscan
IPR036811 all species →	Homologous_superfamily	Ubiquinol-cytochrome C reductase hinge domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15336 all species →	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005750 all species →	Cellular Component	obsolete mitochondrial respiratory chain complex III	Interproscan
GO:0006122 all species →	Biological Process	mitochondrial electron transport, ubiquinol to cytochrome c	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00416	QCR6, UQCRH; ubiquinol-cytochrome c reductase subunit 6	-	Non-alcoholic fatty liver disease	ko04932	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.