Gene detail

Detailed information of evm.model.Ap8.1801_evm.model.Ap8.1802 in Astrangia poculata

Genomic Location: Ap8:19885332...19895586
NR annotation: XP_020614010.1, Down syndrome critical region protein 3 homolog [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14972	Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26C PE=1 SV=1
O35075	Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps26c PE=1 SV=1
Q5RF33	Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26C PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005414 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03643 all species →	Vps26	Vacuolar protein sorting-associated protein 26	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014752 all species →	Homologous_superfamily	Arrestin-like, C-terminal	Interproscan
IPR028934 all species →	Family	Vacuolar protein sorting protein 26 related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12233 all species →	VACUOLAR PROTEIN SORTING 26 RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25730	VPS26C; vacuolar protein sorting-associated protein 26C	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.