Gene detail

Detailed information of evm.model.Ap8.1805.1.5f15e7f4 in Astrangia poculata

Genomic Location: Ap8:19926898...19981043
NR annotation: XP_022805909.1, rho guanine nucleotide exchange factor 11-like isoform X4 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap8.1805.1.5f15e7f4

atggatccggccgaaaatcaagaaggccagcacttgatccaacactgtgtcattatccaacgtgacgaaaaaggctatggtctgactgttacaggggacaatccagtttacgtacagtctgtgaaggaagatggagcagcttaccgtacaggtgtacaagttggtgataagattatcaaggtgaatggaactctggtgacacattacaatcacattgaagttgtcaacctcattaaatctggttcctatgttgcgctgacccttctgggaaaaccaccagctcatcttcaagaaaggcatggatcttcatcacctccgccattgaatattgtaccaaaagacccagtaacagatgagagaacagttactatccaaagggtacttgatcaagagaggcagttttacaagaaaacaagggaggagtatatgagaaaaccatctgaaaagctccaaaaagagctggctgaatcaacaactcgaataaaagcatttgatgcagaactcaatgcgttaatgcagactcagcctagtaacaatggacccttctcagcaccacccggtaaaactgtctccccaacatggcagtcagcaagtcgatttccaaccagatgccattcagtaccatctgaagaaaatgtcagtcccccaccagaacacgaccccaatgcactgtacgataactaccgtccacctgttagtgagcctaacagggaagccccttcttctccacctctgcctcctgaaaggaagttccttaaaggagaccaacttatgcttccagagggtccaatgcatgttagacagcgctccagtccagatgctttcttccgtcccactgtaaatggtagctcctctgataaagctttgcctgtcagagatagcagtactggcaagaaaaagagctttgatgatacagcaggaatgtcacggatgtacaactacttgccgggatctcctgctaaaactcgcaaaaatctgatgacctcgtcccttccaagagcatggaacccaactagtcatgaaaacaaagcaatgcagattgacgatacaagcagtaaaagcagcagcagtggttctccaccggccacaccaacactatcagaaggtcccatggagaagagaagtcgcagtgacacttccgatatctatgctgacggagatgacgagtcgcagtgtgactccatagatagtagcaaactgagtgtcacacaacaatcacatacgtcaatcatctctatggaagatgacgattttgcttcagatgacgagaagatagatgatcatggcccattcaatgatttggagattcttaagaataaaccagctcatatggcagttttccttcattaccttatatctaacagtgatccaagtagtttgttcttttggatggtaacagacacatacagagatggaacaataaaagaaatgaggaaatggtcatatgaaatctactctacatttcttgcagaacgggcgcctcttaaagttgatatggataaagataccattgtagagcccattgtgagttgtttagggttagaagaaaaccttaaaaacctgtttcaacaagcaagggatattgctggagaagaaataaaagaacttttagcagacttcaggaataaacgggctcttggtcttggaagtttatttggagatcaccagcttgaagatgacaacatggacaaaggaaaggaacttcaagtagttgaacaaactctgatgccacacttggagggtgtcttggctgagttggattccaatgcttcagctgatacttcagcgactgacagaaactcggctatggcatcggcccttactacctttttaaagcaagttggaatttctgtaaagcaacaaggaaacaatacaaatatcctggaaagatattcaagcttcacacgaaaagagaataagccattatttaaaattaaagcaagcaaaaaggtgaagggacaccattttgttagtacgcattatacgagtccaaccttctgcaatcattgtagtggtctgttgtggggcattggggatcaaggctacctgtgctcaacttgtgaatacaatgttcacaaaggggcttgctttgaggcaattgaggagtgtccaggaactaagaagaaaagaaaaacaaatcaagccgggagatcaacgtcatttgtaaattataataggaaaattagtcaacaagtcattggtaacaaaaactatgaaaatgatgatgaaaatgagtcagacaatggcagtacagtgcaatacaacaagaaaaaaagtggttcgtttgatgaagatctgatttcaggtggaagagacaatagaataactggagatgaatcttctaaatctgagagggaaggatttacgagttctggtgaagatgatagattgtctaaattgaagagcagctccagtgaactgttccttgataaacctcacttaacaaaaggcattgggagatcggagagtatgaaaacacctagagaattaagtacaaaggcttttataagaataagaaaatcagtggcagctatggatggagatagccttcattaccgaggtgtggagtctcctacaatggatacactctccgaaggtgaagaagaaccggactctgacatggaggtagatgctcaaccaccgccttggcaacaagttgtagataaaaagcttctaaaaaggctaaagggtaaagaaataaaacgacaagaattcattcacgagcttatccatactgaaagaacacatgttagaaatttaaaagtgttaaacaaggtgttctacagaccaatgatgaaaatgaatgttatgtccaaacaatatatcaatcaactatttcccaacttggatgcactagttaaaattcatgtctcgctaatgaagagcatgacgacgagacaagaagaatccgaggatgttattacctgtataggagacgtcatgcttgaaaggtttgacggagaacctggtgagatggctaaagatgcctgtgcagaattttgtaatcatcaaaagtttgcattagagcagcttaagcatcgacaaagaaaagacccaaaacttcaacaatttatagctaactgtgaaaatgatcctctttgtcggagattaagactgcaagacatcatttcatccagttatcaaagactaacgaagtatccgctgctcctggaaggaatacagaaaaatacacccagctctcatcaagatggcaaaaatatcgagagggcaatccagtgtacgaaggatttactagcttttgtgaatcaaagcgttaaggattgtgaagatcgacaaagacttgcagattttcaaagaaaaatcgacaggagacctctcgaaaacaccaacaacaaaatgatggaagagttcaagaatttagacctgaccacaaagaagttggtttatgatggttcactcacgtggagaataagcagaacaaagtctattgatctccatgtactgttgttagaagacttattaattctacttcaaaagcaggatgataagcttgttctgaagtgtcttagtacaacgatctcggcaggataccaggacgtcaagaccacacacagcccaataatcaaactgagtagcgttctcacaagaaatgtagcaacagacaagagagctttctttcttgtgagcacgtcatcttcagtaggaccgcaaatttatgaattagtgacagcaacagtcacagatcgaaaaaactggtataagtacataacagatactgcagaggcctacaaagggaaagaacgtggtcgccgttttgcggtatcagtaggtggccctcgctcagccacggatgtaggtgacttaactgaattacccaacagaagagtcaacagttcgtctacagaagaggaaccagtcaaagaagaaaagaagagtgaaaaggatatgaaggcagatgaggaggacagagaaaaagaaactgatgcggatgacgatgagtctgacgcagctgatgatgatgaagaggaacctgctcaggaccaggaaaatgatgatgacgaagaggacgaagaaacagagagcgaggcaccagcggcacaggaggaaatgccagtgcctaagattgtggagccttctgttgagcaggagtcacaagttgaatctgagtccgaacctgaatcagaaccagaaacagagactgaagtgacagagaaggaggaggaggaggttaaagaagaggtggaggtgcagaatgaatcaccagttaaactgcagattgcaactgaatccagtcctcccagtgactcagaaactgaagttctgtcagctgaagacagtgaagccccaggctcttcacctctcaacagggcagctttggccgatcttacaaatgaggagagtgtggatgagagatctccttcttcagagcggaacaggaatagcatgacttctgaatcatcctctagttcatctaatgacacactgaagataagaggaagctatgcacacatgtccgctgatgaacaagatgactccatgagtggacattcatctcgctcatcagtcatgttacttggtatgtttacagttagtcttgcaaaacaatataaaataaaaactccagcaaaattatttctgggttatctttgtttattcgttttattttaccatgcacgatatcttggatttagtttcttgttttttgtgtgttcatattttattacacggcaatttggcaagtattatccaagctcctctggaatcaatgaaatgttc

Transcript

evm.model.Ap8.1805.1.5f15e7f4

ATGGATCCGGCCGAAAATCAAGAAGGCCAGCACTTGATCCAACACTGTGTCATTATCCAACGTGACGAAAAAGGCTATGGTCTGACTGTTACAGGGGACAATCCAGTTTACGTACAGTCTGTGAAGGAAGATGGAGCAGCTTACCGTACAGGTGTACAAGTTGGTGATAAGATTATCAAGGTGAATGGAACTCTGGTGACACATTACAATCACATTGAAGTTGTCAACCTCATTAAATCTGGTTCCTATGTTGCGCTGACCCTTCTGGGAAAACCACCAGCTCATCTTCAAGAAAGGCATGGATCTTCATCACCTCCGCCATTGAATATTGTACCAAAAGACCCAGTAACAGATGAGAGAACAGTTACTATCCAAAGGGTACTTGATCAAGAGAGGCAGTTTTACAAGAAAACAAGGGAGGAGTATATGAGAAAACCATCTGAAAAGCTCCAAAAAGAGCTGGCTGAATCAACAACTCGAATAAAAGCATTTGATGCAGAACTCAATGCGTTAATGCAGACTCAGCCTAGTAACAATGGACCCTTCTCAGCACCACCCGGTAAAACTGTCTCCCCAACATGGCAGTCAGCAAGTCGATTTCCAACCAGATGCCATTCAGTACCATCTGAAGAAAATGTCAGTCCCCCACCAGAACACGACCCCAATGCACTGTACGATAACTACCGTCCACCTGTTAGTGAGCCTAACAGGGAAGCCCCTTCTTCTCCACCTCTGCCTCCTGAAAGGAAGTTCCTTAAAGGAGACCAACTTATGCTTCCAGAGGGTCCAATGCATGTTAGACAGCGCTCCAGTCCAGATGCTTTCTTCCGTCCCACTGTAAATGGTAGCTCCTCTGATAAAGCTTTGCCTGTCAGAGATAGCAGTACTGGCAAGAAAAAGAGCTTTGATGATACAGCAGGAATGTCACGGATGTACAACTACTTGCCGGGATCTCCTGCTAAAACTCGCAAAAATCTGATGACCTCGTCCCTTCCAAGAGCATGGAACCCAACTAGTCATGAAAACAAAGCAATGCAGATTGACGATACAAGCAGTAAAAGCAGCAGCAGTGGTTCTCCACCGGCCACACCAACACTATCAGAAGGTCCCATGGAGAAGAGAAGTCGCAGTGACACTTCCGATATCTATGCTGACGGAGATGACGAGTCGCAGTGTGACTCCATAGATAGTAGCAAACTGAGTGTCACACAACAATCACATACGTCAATCATCTCTATGGAAGATGACGATTTTGCTTCAGATGACGAGAAGATAGATGATCATGGCCCATTCAATGATTTGGAGATTCTTAAGAATAAACCAGCTCATATGGCAGTTTTCCTTCATTACCTTATATCTAACAGTGATCCAAGTAGTTTGTTCTTTTGGATGGTAACAGACACATACAGAGATGGAACAATAAAAGAAATGAGGAAATGGTCATATGAAATCTACTCTACATTTCTTGCAGAACGGGCGCCTCTTAAAGTTGATATGGATAAAGATACCATTGTAGAGCCCATTGTGAGTTGTTTAGGGTTAGAAGAAAACCTTAAAAACCTGTTTCAACAAGCAAGGGATATTGCTGGAGAAGAAATAAAAGAACTTTTAGCAGACTTCAGGAATAAACGGGCTCTTGGTCTTGGAAGTTTATTTGGAGATCACCAGCTTGAAGATGACAACATGGACAAAGGAAAGGAACTTCAAGTAGTTGAACAAACTCTGATGCCACACTTGGAGGGTGTCTTGGCTGAGTTGGATTCCAATGCTTCAGCTGATACTTCAGCGACTGACAGAAACTCGGCTATGGCATCGGCCCTTACTACCTTTTTAAAGCAAGTTGGAATTTCTGTAAAGCAACAAGGAAACAATACAAATATCCTGGAAAGATATTCAAGCTTCACACGAAAAGAGAATAAGCCATTATTTAAAATTAAAGCAAGCAAAAAGGTGAAGGGACACCATTTTGTTAGTACGCATTATACGAGTCCAACCTTCTGCAATCATTGTAGTGGTCTGTTGTGGGGCATTGGGGATCAAGGCTACCTGTGCTCAACTTGTGAATACAATGTTCACAAAGGGGCTTGCTTTGAGGCAATTGAGGAGTGTCCAGGAACTAAGAAGAAAAGAAAAACAAATCAAGCCGGGAGATCAACGTCATTTGTAAATTATAATAGGAAAATTAGTCAACAAGTCATTGGTAACAAAAACTATGAAAATGATGATGAAAATGAGTCAGACAATGGCAGTACAGTGCAATACAACAAGAAAAAAAGTGGTTCGTTTGATGAAGATCTGATTTCAGGTGGAAGAGACAATAGAATAACTGGAGATGAATCTTCTAAATCTGAGAGGGAAGGATTTACGAGTTCTGGTGAAGATGATAGATTGTCTAAATTGAAGAGCAGCTCCAGTGAACTGTTCCTTGATAAACCTCACTTAACAAAAGGCATTGGGAGATCGGAGAGTATGAAAACACCTAGAGAATTAAGTACAAAGGCTTTTATAAGAATAAGAAAATCAGTGGCAGCTATGGATGGAGATAGCCTTCATTACCGAGGTGTGGAGTCTCCTACAATGGATACACTCTCCGAAGGTGAAGAAGAACCGGACTCTGACATGGAGGTAGATGCTCAACCACCGCCTTGGCAACAAGTTGTAGATAAAAAGCTTCTAAAAAGGCTAAAGGGTAAAGAAATAAAACGACAAGAATTCATTCACGAGCTTATCCATACTGAAAGAACACATGTTAGAAATTTAAAAGTGTTAAACAAGGTGTTCTACAGACCAATGATGAAAATGAATGTTATGTCCAAACAATATATCAATCAACTATTTCCCAACTTGGATGCACTAGTTAAAATTCATGTCTCGCTAATGAAGAGCATGACGACGAGACAAGAAGAATCCGAGGATGTTATTACCTGTATAGGAGACGTCATGCTTGAAAGGTTTGACGGAGAACCTGGTGAGATGGCTAAAGATGCCTGTGCAGAATTTTGTAATCATCAAAAGTTTGCATTAGAGCAGCTTAAGCATCGACAAAGAAAAGACCCAAAACTTCAACAATTTATAGCTAACTGTGAAAATGATCCTCTTTGTCGGAGATTAAGACTGCAAGACATCATTTCATCCAGTTATCAAAGACTAACGAAGTATCCGCTGCTCCTGGAAGGAATACAGAAAAATACACCCAGCTCTCATCAAGATGGCAAAAATATCGAGAGGGCAATCCAGTGTACGAAGGATTTACTAGCTTTTGTGAATCAAAGCGTTAAGGATTGTGAAGATCGACAAAGACTTGCAGATTTTCAAAGAAAAATCGACAGGAGACCTCTCGAAAACACCAACAACAAAATGATGGAAGAGTTCAAGAATTTAGACCTGACCACAAAGAAGTTGGTTTATGATGGTTCACTCACGTGGAGAATAAGCAGAACAAAGTCTATTGATCTCCATGTACTGTTGTTAGAAGACTTATTAATTCTACTTCAAAAGCAGGATGATAAGCTTGTTCTGAAGTGTCTTAGTACAACGATCTCGGCAGGATACCAGGACGTCAAGACCACACACAGCCCAATAATCAAACTGAGTAGCGTTCTCACAAGAAATGTAGCAACAGACAAGAGAGCTTTCTTTCTTGTGAGCACGTCATCTTCAGTAGGACCGCAAATTTATGAATTAGTGACAGCAACAGTCACAGATCGAAAAAACTGGTATAAGTACATAACAGATACTGCAGAGGCCTACAAAGGGAAAGAACGTGGTCGCCGTTTTGCGGTATCAGTAGGTGGCCCTCGCTCAGCCACGGATGTAGGTGACTTAACTGAATTACCCAACAGAAGAGTCAACAGTTCGTCTACAGAAGAGGAACCAGTCAAAGAAGAAAAGAAGAGTGAAAAGGATATGAAGGCAGATGAGGAGGACAGAGAAAAAGAAACTGATGCGGATGACGATGAGTCTGACGCAGCTGATGATGATGAAGAGGAACCTGCTCAGGACCAGGAAAATGATGATGACGAAGAGGACGAAGAAACAGAGAGCGAGGCACCAGCGGCACAGGAGGAAATGCCAGTGCCTAAGATTGTGGAGCCTTCTGTTGAGCAGGAGTCACAAGTTGAATCTGAGTCCGAACCTGAATCAGAACCAGAAACAGAGACTGAAGTGACAGAGAAGGAGGAGGAGGAGGTTAAAGAAGAGGTGGAGGTGCAGAATGAATCACCAGTTAAACTGCAGATTGCAACTGAATCCAGTCCTCCCAGTGACTCAGAAACTGAAGTTCTGTCAGCTGAAGACAGTGAAGCCCCAGGCTCTTCACCTCTCAACAGGGCAGCTTTGGCCGATCTTACAAATGAGGAGAGTGTGGATGAGAGATCTCCTTCTTCAGAGCGGAACAGGAATAGCATGACTTCTGAATCATCCTCTAGTTCATCTAATGACACACTGAAGATAAGAGGAAGCTATGCACACATGTCCGCTGATGAACAAGATGACTCCATGAGTGGACATTCATCTCGCTCATCAGTCATGTTACTTGGTATGTTTACAGTTAGTCTTGCAAAACAATATAAAATAAAAACTCCAGCAAAATTATTTCTGGGTTATCTTTGTTTATTCGTTTTATTTTACCATGCACGATATCTTGGATTTAGTTTCTTGTTTTTTGTGTGTTCATATTTTATTACACGGCAATTTGGCAAGTATTATCCAAGCTCCTCTGGAATCAATGAAATGTTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O15085	Rho guanine nucleotide exchange factor 11 OS=Homo sapiens OX=9606 GN=ARHGEF11 PE=1 SV=1
Q9NZN5	Rho guanine nucleotide exchange factor 12 OS=Homo sapiens OX=9606 GN=ARHGEF12 PE=1 SV=1
Q8R4H2	Rho guanine nucleotide exchange factor 12 OS=Mus musculus OX=10090 GN=Arhgef12 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001658 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF17838 all species →	PH_16	PH domain	Domain	Interproscan
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF09128 all species →	RGS-like	Regulator of G protein signalling-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR016137 all species →	Domain	RGS domain	Interproscan
IPR020454 all species →	Domain	Diacylglycerol/phorbol-ester binding	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR036305 all species →	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR041020 all species →	Domain	ARHGEF1-like, PH domain	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR015212 all species →	Domain	Regulator of G protein signalling-like domain	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR044926 all species →	Homologous_superfamily	RGS, subdomain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45872 all species →	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0001664 all species →	Molecular Function	G protein-coupled receptor binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap8.1805.1.5f15e7f4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap8.1805.1.5f15e7f4 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples

0TPM > 0

4Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole organism · cold control	14	0	0.00	0.00
whole organism · heat control	12	0	0.00	0.00
whole organism · cold challenge	12	0	0.00	0.00
whole organism · heat challenge	11	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR10674714	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674715	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674724	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674733	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674734	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674735	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674736	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674737	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674739	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674743	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674746	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674747	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674748	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674750	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674706	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674707	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674708	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674717	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674718	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674720	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674721	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674725	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674731	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674741	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674752	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674753	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674711	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674712	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674713	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674722	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674723	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674730	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674732	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674738	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674740	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674744	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674745	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674749	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674709	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674710	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674716	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674719	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674726	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674727	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674728	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674729	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674742	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674751	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674754	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.