Detailed information of evm.model.Ap8.1844 in Astrangia poculata

Genomic Location: Ap8:20465483...20481724
NR annotation: XP_020623371.1, UDP-glucuronic acid decarboxylase 1-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5PQX0UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus OX=10116 GN=Uxs1 PE=1 SV=1
Q91XL3UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1
Q8NBZ7UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003385 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01370
all species →		EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044516
all species →		FamilyUDP-glucuronic acid decarboxylaseInterproscan
IPR001509
all species →		DomainNAD-dependent epimerase/dehydrataseInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43078
all species →		UDP-GLUCURONIC ACID DECARBOXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0042732
all species →		Biological ProcessD-xylose metabolic processInterproscan
GO:0048040
all species →		Molecular FunctionUDP-glucuronate decarboxylase activityInterproscan
GO:0070403
all species →		Molecular FunctionNAD+ bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08678UXS1, uxs; UDP-glucuronate decarboxylaseEC:4.1.1.35
Amino sugar and nucleotide sugar metabolismko00520deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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