Gene detail

Detailed information of evm.model.Ap8.2045.2.5f15e81b in Astrangia poculata

Genomic Location: Ap8:22553727...22559171
NR annotation: XP_020621638.1, dual serine/threonine and tyrosine protein kinase-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap8.2045.2.5f15e81b

atgcctcttaaagatgtgttcgaagattttcgaaaaagcaaggctactctagtgaaaattcacaacgacacagtccaatactttgatgaaatcgttgggaagctttctaatcagcgcgatgcaaagattgcagttgagcttagctacgccagctcgccaccgacgtctcccgatgaagtgaaagtgatgacccaagcggcagctttggctgacatcaatctagagtttgacccgaatctggctgaattactatacacctcgcaggagaaaaaggaagtaacttctctgttctcgcaagagccagcgctgatctttgttggtcaaacgaattgcggcaagagctccatcataaacgagattttaggctgcaagtcacttccgacttcagatcagcccagcaccgcgaggattgtccgcgtctcctacgccgagaaaccgttctgtcaactggtgggcaaagatggtaaacccattcaggaaatagaattaaaagggaagaacaaaatccctcggaagaaaatcgagctcagccagaaagaccgcgtggatgctaccaaggtggaagcgaccgtggagaccgggctaaatatcgagttcttgaagtctggtgtaagcatcatcgactcgcccggaagaaatgaaaatgatgcactggacaacctggtgaaggagaagctggaaaatccactggcgtttgtgatttacgtggtcgacggacataacctgtttacaaagcaggatagagaggtcttgagtgaaatgacatcccgaagacctgatttgcaaatttttttcgtggtaagtaaactcgaacctgaagatcgcaccgaatcttcagatgaagacaaagagccaggaggctcttcacaatcaagaattcgcgagtccgaagtacagtcaagaaagaaacagcgagtgtacgagagacttgttaaatacgggttcctctcagcagagactggcgtgggcatggatcaaaacgaacgattccacggactctctgcttggcggatccaaaggttcaatgagatgaagaagaagaaccctaatgcatccagtgatgattttaccgggtacattgaagcgtttgacagatttcaggagagcctgaagaagtttgctgaagaatctttacgcgccagggtggagcaagtttgccaaatcctgatccgagtcttgtcaaggtgcttggatttcttcattcagaaggccaatgttctgaagaagggcaagaagctgatggagaaaacgcttcagacacttctgcaagaggaaagggaggtgcacgacaacatcagtcgcaacctggacgaaaaggccaaccatattcaagatttactgactgaaacgtttaatggggcacacgatggaatcctcaaggaagcagaaaagtttgagtacgttctgacagattttaccattccccaaagtggtttcgtaacacagaaagcagccgtaggccattgccaggaccagctgcaacatatggtggtcaataaactccaaggagaggtcaatgaaaagttgagcatgatgtttcattccagagacctgtttgtcactcagctgaaagaacgcatcgagcaagtcgagaaagaaatcacaggcgatagggaagttccctccgcagctctggcccttgggaaaagccttctttcttcttacgaagcccagattacgtttggaaaacaggacggtgcaattctacgcttcattacgaaattggctatctggttttacaacgccatttgtgacccaatcgataccatcatcaacaccgtcacagggaaagttgaggtcggttcatctaaatggaagacgaagattgcctcaaacgtcctcaagaaagtggatccgtctaagatggccaaggaaatcgtcaccaatctgaaagcacacttttgtacctgccatgaagagttcactggggaaatcaataaagtccaagacctgttcacccgaggggagaccatcagcgacgaacaaagggggaaggttcttgagtttgctccaaatcttgccctcctagagatgctggcgtatggtgtcatggacagatttaaatttggcctgccgcgtaaaggagaccttattggcactggagcgcaaggcagtgtgtttgcctgtgacaacatcacgactcccgaaggcaagccctgcgtggtgaaagtggtaggtgttgcttcagaggaagtactcaaggatttgacgttggaactacacaatacaaggtctcttcaacatccgaacattctacccatactgtgcaccatagtggaggctaatccatttcgaggcctttctgcgtcgcttgtctcagagcgaatgaggtgcgatcttcaagaaggtttaccagccattccttctatgaggaagagactggaaatagcgcttgatgttgccaaagccttgcggtatctgcacgcggaagatttgattcatcgagatgtcaaagtacagaatgttttgttggacgagaacaacagggctaagcttaccgacatgggcctttgcaagcccgaaggccttgcaagtaactcgctggtaggaacgccgataaacatggcgcccgaaatgatcaaacaacagtacgacaaaaccattgacgtctacgcgtttggtatgttgctatggagggtgtgcgaaggtaagggcaaccaaccacagaacgttaaccgccattttctacctctggtaatgctcatgttgaacgccctggagaacaagacgcctgagaggttggacgtgtttccgcaaagctgttggtaccttatggaaaagtgctggaataaggagcccgaagaaaggccgtcatttgacaccgtggtaaaggagctgaaaaagatccttcgagatgctagcattgaataa

Transcript

evm.model.Ap8.2045.2.5f15e81b

ATGCCTCTTAAAGATGTGTTCGAAGATTTTCGAAAAAGCAAGGCTACTCTAGTGAAAATTCACAACGACACAGTCCAATACTTTGATGAAATCGTTGGGAAGCTTTCTAATCAGCGCGATGCAAAGATTGCAGTTGAGCTTAGCTACGCCAGCTCGCCACCGACGTCTCCCGATGAAGTGAAAGTGATGACCCAAGCGGCAGCTTTGGCTGACATCAATCTAGAGTTTGACCCGAATCTGGCTGAATTACTATACACCTCGCAGGAGAAAAAGGAAGTAACTTCTCTGTTCTCGCAAGAGCCAGCGCTGATCTTTGTTGGTCAAACGAATTGCGGCAAGAGCTCCATCATAAACGAGATTTTAGGCTGCAAGTCACTTCCGACTTCAGATCAGCCCAGCACCGCGAGGATTGTCCGCGTCTCCTACGCCGAGAAACCGTTCTGTCAACTGGTGGGCAAAGATGGTAAACCCATTCAGGAAATAGAATTAAAAGGGAAGAACAAAATCCCTCGGAAGAAAATCGAGCTCAGCCAGAAAGACCGCGTGGATGCTACCAAGGTGGAAGCGACCGTGGAGACCGGGCTAAATATCGAGTTCTTGAAGTCTGGTGTAAGCATCATCGACTCGCCCGGAAGAAATGAAAATGATGCACTGGACAACCTGGTGAAGGAGAAGCTGGAAAATCCACTGGCGTTTGTGATTTACGTGGTCGACGGACATAACCTGTTTACAAAGCAGGATAGAGAGGTCTTGAGTGAAATGACATCCCGAAGACCTGATTTGCAAATTTTTTTCGTGGTAAGTAAACTCGAACCTGAAGATCGCACCGAATCTTCAGATGAAGACAAAGAGCCAGGAGGCTCTTCACAATCAAGAATTCGCGAGTCCGAAGTACAGTCAAGAAAGAAACAGCGAGTGTACGAGAGACTTGTTAAATACGGGTTCCTCTCAGCAGAGACTGGCGTGGGCATGGATCAAAACGAACGATTCCACGGACTCTCTGCTTGGCGGATCCAAAGGTTCAATGAGATGAAGAAGAAGAACCCTAATGCATCCAGTGATGATTTTACCGGGTACATTGAAGCGTTTGACAGATTTCAGGAGAGCCTGAAGAAGTTTGCTGAAGAATCTTTACGCGCCAGGGTGGAGCAAGTTTGCCAAATCCTGATCCGAGTCTTGTCAAGGTGCTTGGATTTCTTCATTCAGAAGGCCAATGTTCTGAAGAAGGGCAAGAAGCTGATGGAGAAAACGCTTCAGACACTTCTGCAAGAGGAAAGGGAGGTGCACGACAACATCAGTCGCAACCTGGACGAAAAGGCCAACCATATTCAAGATTTACTGACTGAAACGTTTAATGGGGCACACGATGGAATCCTCAAGGAAGCAGAAAAGTTTGAGTACGTTCTGACAGATTTTACCATTCCCCAAAGTGGTTTCGTAACACAGAAAGCAGCCGTAGGCCATTGCCAGGACCAGCTGCAACATATGGTGGTCAATAAACTCCAAGGAGAGGTCAATGAAAAGTTGAGCATGATGTTTCATTCCAGAGACCTGTTTGTCACTCAGCTGAAAGAACGCATCGAGCAAGTCGAGAAAGAAATCACAGGCGATAGGGAAGTTCCCTCCGCAGCTCTGGCCCTTGGGAAAAGCCTTCTTTCTTCTTACGAAGCCCAGATTACGTTTGGAAAACAGGACGGTGCAATTCTACGCTTCATTACGAAATTGGCTATCTGGTTTTACAACGCCATTTGTGACCCAATCGATACCATCATCAACACCGTCACAGGGAAAGTTGAGGTCGGTTCATCTAAATGGAAGACGAAGATTGCCTCAAACGTCCTCAAGAAAGTGGATCCGTCTAAGATGGCCAAGGAAATCGTCACCAATCTGAAAGCACACTTTTGTACCTGCCATGAAGAGTTCACTGGGGAAATCAATAAAGTCCAAGACCTGTTCACCCGAGGGGAGACCATCAGCGACGAACAAAGGGGGAAGGTTCTTGAGTTTGCTCCAAATCTTGCCCTCCTAGAGATGCTGGCGTATGGTGTCATGGACAGATTTAAATTTGGCCTGCCGCGTAAAGGAGACCTTATTGGCACTGGAGCGCAAGGCAGTGTGTTTGCCTGTGACAACATCACGACTCCCGAAGGCAAGCCCTGCGTGGTGAAAGTGGTAGGTGTTGCTTCAGAGGAAGTACTCAAGGATTTGACGTTGGAACTACACAATACAAGGTCTCTTCAACATCCGAACATTCTACCCATACTGTGCACCATAGTGGAGGCTAATCCATTTCGAGGCCTTTCTGCGTCGCTTGTCTCAGAGCGAATGAGGTGCGATCTTCAAGAAGGTTTACCAGCCATTCCTTCTATGAGGAAGAGACTGGAAATAGCGCTTGATGTTGCCAAAGCCTTGCGGTATCTGCACGCGGAAGATTTGATTCATCGAGATGTCAAAGTACAGAATGTTTTGTTGGACGAGAACAACAGGGCTAAGCTTACCGACATGGGCCTTTGCAAGCCCGAAGGCCTTGCAAGTAACTCGCTGGTAGGAACGCCGATAAACATGGCGCCCGAAATGATCAAACAACAGTACGACAAAACCATTGACGTCTACGCGTTTGGTATGTTGCTATGGAGGGTGTGCGAAGGTAAGGGCAACCAACCACAGAACGTTAACCGCCATTTTCTACCTCTGGTAATGCTCATGTTGAACGCCCTGGAGAACAAGACGCCTGAGAGGTTGGACGTGTTTCCGCAAAGCTGTTGGTACCTTATGGAAAAGTGCTGGAATAAGGAGCCCGAAGAAAGGCCGTCATTTGACACCGTGGTAAAGGAGCTGAAAAAGATCCTTCGAGATGCTAGCATTGAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q67E01	Dual serine/threonine and tyrosine protein kinase OS=Xenopus laevis OX=8355 GN=dstyk PE=2 SV=1
Q67E00	Dual serine/threonine and tyrosine protein kinase OS=Xenopus tropicalis OX=8364 GN=dstyk PE=2 SV=1
Q4VSN4	Dual serine/threonine and tyrosine protein kinase OS=Canis lupus familiaris OX=9615 GN=DSTYK PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006084 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan
IPR051302 all species →	Family	Dual Ser/Thr and Tyr Protein Kinase	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46392 all species →	DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043066 all species →	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0044344 all species →	Biological Process	cellular response to fibroblast growth factor stimulus	Interproscan
GO:0045743 all species →	Biological Process	positive regulation of fibroblast growth factor receptor signaling pathway	Interproscan
GO:0070374 all species →	Biological Process	positive regulation of ERK1 and ERK2 cascade	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16288	DSTYK, RIPK5; dual serine/threonine and tyrosine protein kinase	EC:2.7.12.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.