Gene detail

Detailed information of evm.model.Ap8.2063 in Astrangia poculata

Genomic Location: Ap8:22743054...22753023
NR annotation: XP_020621660.1, sperm receptor for egg jelly-like, partial [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap8.2063

atgaaagtgattttactggtgtttgtcataaagatattgtgcttttgcgaagctcagtttccgagcggtttctctgtctatgtcactgattatctgttgaccccacaggagttttctgcagcaaatgtgacctgtgtagcttttgatacagcaggagttagggatcccgagaaaataaagttttttaggggagacggaaaaggacgtccagaaattacagctgatgacaacttgtactttacaaatcgaacagagaagcttgataacaaaacaaagcttttcgtcacactacacttccgaaatgtaacgcgtgaggatgacagtcgatatggggatcagtacgaatgtcacgcattcgcaaagggtgatctagtggaaagaagtagggctttctttgacgtacatgttaattcaacccgaccagtactaaagtgtttcaaatgtcttggctcaggccaagaatgccgctacgaagtggtatctaaaaacagaagcgcccaagttgcttgtgaaggatacgaggaccgatgttactgggcttaccaaagaattaatagcagcctggaaggtttcataatggggtgtaaaactaaaccatattgcgaaaagatacctcgacaagccgaaaaagcagtgaggtctaattttatggaatgctttgatatatcatgttgtgactcagacttctgcaacaaaccgatgtatacagatggcagattttgtaagaggaaacaaaatctggtggcggttatctacggaggagccgaagtcatccgaggatttaacgaaaacattgcgatgaacggctcgctttcctatgaccccgaaacaggtgataacaaaggaatgaacttcacttggcgttacggcagcataccaagaaacagcaactctagtcgccatttgctaaaacagggctcgtttccaccagtaaatttctcagccgtgcaaaatgaaaaggttagctttgggcgcatcatttcgatcaacgccaatgctacaaacggcagtgagacatttgttatcactttgaccgtaaccaaaggccatcgcactgcaagcgccattcaagttgttcaccttgttagaggagatccacccagaatatttcaaagatgcctgataaattgtggtccaaaattagttccttcagtcaaactgagcattgaaacaatctgccaaggtgcacagtgctcaaacataacatcgtacaactggatactctaccaaggagagcagtccaatccaatcgtgtggaaaagaagaaatgatttacaattgataacaagcacacctctaaattcaagctggattgctataaaggagagttcactcgccggaggcaaaaactaccgattggcagtacttgttacaaatgcacatggctttgccggaataagtgcatacgattttgcaacatcactgcctcctggaggagggacatgtaccataaaacctaagtcaggaatttcattgaggacctacttccatctgagttgcagtggctggactagttacaactttcccttatcctaccagttccgatatcaactaaacaacgggttgaccaatgtggtataccatggcttaaatacctcagttgtttctctgttgccgtctggagacatgacaaataacttcacattgaatttcgttgtgactgtgactgatagcagcggtgcctctacgacatacgtaaacttgtctgctcaggaaaaacaaaccttttcatgttcgtgccaaccaccttggacgggagaatcatgtgaaattaaaacggaaatagcaaccttgaacagttcgacgtgcaaggaagtttatgataagaacttgtccaaacagaacggagcctactcgctcaatgttggctctgagacaattgacgtgttttgtcacatgaccagccttggcgcatgcggcggaaatggatggacgctggttataaaaataaatggcgcgctaaaaacctttcgctatgactctaatcgctggagcaacaagaaaaccttcaactctgaaggagggaagactgggtttgacacacaagagaccaagttaccgacctactggaacacgcccttcaccaggatctgcctcggtatgaagattggtgagcagagcaggttcattgctatcaacatgaccgccaactctctgtactcactgatcgcggacgggaaataccgcgccacttcactgggccgtgacacgtggaagacgctattaggttcacaggctttcttatacaccagttgtaacagtgaaggatttaatgttaagaccgatgacagcggttttttgcataaagcaaggattggcattcttggtaccgacagatacggcagttgcttcacttctgactccagaattggatttggcacagcaggtttcccctatgacagcaacacttgtggaaacgaagtcgagttttcattcaatgtaaacgaaagacacatcaaggcaatgggatatatcctggtgcaatga

Transcript

evm.model.Ap8.2063

ATGAAAGTGATTTTACTGGTGTTTGTCATAAAGATATTGTGCTTTTGCGAAGCTCAGTTTCCGAGCGGTTTCTCTGTCTATGTCACTGATTATCTGTTGACCCCACAGGAGTTTTCTGCAGCAAATGTGACCTGTGTAGCTTTTGATACAGCAGGAGTTAGGGATCCCGAGAAAATAAAGTTTTTTAGGGGAGACGGAAAAGGACGTCCAGAAATTACAGCTGATGACAACTTGTACTTTACAAATCGAACAGAGAAGCTTGATAACAAAACAAAGCTTTTCGTCACACTACACTTCCGAAATGTAACGCGTGAGGATGACAGTCGATATGGGGATCAGTACGAATGTCACGCATTCGCAAAGGGTGATCTAGTGGAAAGAAGTAGGGCTTTCTTTGACGTACATGTTAATTCAACCCGACCAGTACTAAAGTGTTTCAAATGTCTTGGCTCAGGCCAAGAATGCCGCTACGAAGTGGTATCTAAAAACAGAAGCGCCCAAGTTGCTTGTGAAGGATACGAGGACCGATGTTACTGGGCTTACCAAAGAATTAATAGCAGCCTGGAAGGTTTCATAATGGGGTGTAAAACTAAACCATATTGCGAAAAGATACCTCGACAAGCCGAAAAAGCAGTGAGGTCTAATTTTATGGAATGCTTTGATATATCATGTTGTGACTCAGACTTCTGCAACAAACCGATGTATACAGATGGCAGATTTTGTAAGAGGAAACAAAATCTGGTGGCGGTTATCTACGGAGGAGCCGAAGTCATCCGAGGATTTAACGAAAACATTGCGATGAACGGCTCGCTTTCCTATGACCCCGAAACAGGTGATAACAAAGGAATGAACTTCACTTGGCGTTACGGCAGCATACCAAGAAACAGCAACTCTAGTCGCCATTTGCTAAAACAGGGCTCGTTTCCACCAGTAAATTTCTCAGCCGTGCAAAATGAAAAGGTTAGCTTTGGGCGCATCATTTCGATCAACGCCAATGCTACAAACGGCAGTGAGACATTTGTTATCACTTTGACCGTAACCAAAGGCCATCGCACTGCAAGCGCCATTCAAGTTGTTCACCTTGTTAGAGGAGATCCACCCAGAATATTTCAAAGATGCCTGATAAATTGTGGTCCAAAATTAGTTCCTTCAGTCAAACTGAGCATTGAAACAATCTGCCAAGGTGCACAGTGCTCAAACATAACATCGTACAACTGGATACTCTACCAAGGAGAGCAGTCCAATCCAATCGTGTGGAAAAGAAGAAATGATTTACAATTGATAACAAGCACACCTCTAAATTCAAGCTGGATTGCTATAAAGGAGAGTTCACTCGCCGGAGGCAAAAACTACCGATTGGCAGTACTTGTTACAAATGCACATGGCTTTGCCGGAATAAGTGCATACGATTTTGCAACATCACTGCCTCCTGGAGGAGGGACATGTACCATAAAACCTAAGTCAGGAATTTCATTGAGGACCTACTTCCATCTGAGTTGCAGTGGCTGGACTAGTTACAACTTTCCCTTATCCTACCAGTTCCGATATCAACTAAACAACGGGTTGACCAATGTGGTATACCATGGCTTAAATACCTCAGTTGTTTCTCTGTTGCCGTCTGGAGACATGACAAATAACTTCACATTGAATTTCGTTGTGACTGTGACTGATAGCAGCGGTGCCTCTACGACATACGTAAACTTGTCTGCTCAGGAAAAACAAACCTTTTCATGTTCGTGCCAACCACCTTGGACGGGAGAATCATGTGAAATTAAAACGGAAATAGCAACCTTGAACAGTTCGACGTGCAAGGAAGTTTATGATAAGAACTTGTCCAAACAGAACGGAGCCTACTCGCTCAATGTTGGCTCTGAGACAATTGACGTGTTTTGTCACATGACCAGCCTTGGCGCATGCGGCGGAAATGGATGGACGCTGGTTATAAAAATAAATGGCGCGCTAAAAACCTTTCGCTATGACTCTAATCGCTGGAGCAACAAGAAAACCTTCAACTCTGAAGGAGGGAAGACTGGGTTTGACACACAAGAGACCAAGTTACCGACCTACTGGAACACGCCCTTCACCAGGATCTGCCTCGGTATGAAGATTGGTGAGCAGAGCAGGTTCATTGCTATCAACATGACCGCCAACTCTCTGTACTCACTGATCGCGGACGGGAAATACCGCGCCACTTCACTGGGCCGTGACACGTGGAAGACGCTATTAGGTTCACAGGCTTTCTTATACACCAGTTGTAACAGTGAAGGATTTAATGTTAAGACCGATGACAGCGGTTTTTTGCATAAAGCAAGGATTGGCATTCTTGGTACCGACAGATACGGCAGTTGCTTCACTTCTGACTCCAGAATTGGATTTGGCACAGCAGGTTTCCCCTATGACAGCAACACTTGTGGAAACGAAGTCGAGTTTTCATTCAATGTAAACGAAAGACACATCAAGGCAATGGGATATATCCTGGTGCAATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B8VIU6	Uncharacterized skeletal organic matrix protein 5 OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001146 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02010 all species →	REJ	REJ domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045860 all species →	Homologous_superfamily	Snake toxin-like superfamily	Interproscan
IPR002859 all species →	Domain	PKD/REJ-like domain	Interproscan
IPR014010 all species →	Domain	REJ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46730 all species →	POLYCYSTIN-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006816 all species →	Biological Process	calcium ion transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap8.2063.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.