Gene detail

Detailed information of evm.model.Ap8.2088 in Astrangia poculata

Genomic Location: Ap8:22979031...22989484
NR annotation: XP_022797319.1, patatin-like phospholipase domain-containing protein 4 isoform X2 [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P41247	Patatin-like phospholipase domain-containing protein 4 OS=Homo sapiens OX=9606 GN=PNPLA4 PE=1 SV=3
P0C548	Patatin-like phospholipase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Pnpla2 PE=1 SV=1
Q8BJ56	Patatin-like phospholipase domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pnpla2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001481 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01734 all species →	Patatin	Patatin-like phospholipase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002641 all species →	Domain	Patatin-like phospholipase domain	Interproscan
IPR033562 all species →	Family	Patatin-like phospholipase domain-containing protein	Interproscan
IPR016035 all species →	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12406 all species →	CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0004806 all species →	Molecular Function	triacylglycerol lipase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005811 all species →	Cellular Component	lipid droplet	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016042 all species →	Biological Process	lipid catabolic process	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0019433 all species →	Biological Process	triglyceride catabolic process	Interproscan
GO:0055088 all species →	Biological Process	lipid homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11157	PNPLA4; patatin-like phospholipase domain-containing protein 4	EC:3.1.1.-	Retinol metabolism	ko00830	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.