Detailed information of evm.model.Ap8.2120 in Astrangia poculata

Genomic Location: Ap8:23338506...23360676
NR annotation: CAH3030813.1, unnamed protein product [Porites evermanni]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A4D6G3C8Cholesterol oxidase OS=Acinetobacter baumannii OX=470 GN=choxAB PE=1 SV=1
P9WMV8Cholesterol oxidase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=choD PE=3 SV=1
P9WMV9Cholesterol oxidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=choD PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001043 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12697
all species →		Abhydrolase_6Alpha/beta hydrolase familyDomainInterproscan
PF05199
all species →		GMC_oxred_CGMC oxidoreductaseDomainInterproscan
PF00149
all species →		MetallophosCalcineurin-like phosphoesteraseDomainInterproscan
PF00732
all species →		GMC_oxred_NGMC oxidoreductaseDomainInterproscan
PF00890
all species →		FAD_binding_2FAD binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000073
all species →		DomainAlpha/beta hydrolase fold-1Interproscan
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR029058
all species →		Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR007867
all species →		DomainGlucose-methanol-choline oxidoreductase, C-terminalInterproscan
IPR004843
all species →		DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR029052
all species →		Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR052542
all species →		FamilyCholesterol Oxidase EnzymeInterproscan
IPR000172
all species →		DomainGlucose-methanol-choline oxidoreductase, N-terminalInterproscan
IPR003953
all species →		DomainFAD-dependent oxidoreductase 2, FAD binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47470
all species →		CHOLESTEROL OXIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016614
all species →		Molecular Functionoxidoreductase activity, acting on CH-OH group of donorsInterproscan
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.2120.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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