Detailed information of evm.model.Ap8.2236 in Astrangia poculata

Genomic Location: Ap8:24734165...24736582
NR annotation: CAB3986870.1, ATP-dependent DNA helicase PIF1 [Paramuricea clavata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000131 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20209
all species →		DUF6570Domain of unknown function (DUF6570)DomainInterproscan
PF04843
all species →		Herpes_teg_NHerpesvirus tegument protein, N-terminal conserved regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046700
all species →		DomainDomain of unknown function DUF6570Interproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR006928
all species →		DomainHerpesvirus large tegument protein, USP domainInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap8.2236. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap8.2236. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.2236.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP