Gene detail

Detailed information of evm.model.Ap8.224.1.5f15e58b in Astrangia poculata

Genomic Location: Ap8:2168594...2191831
NR annotation: XP_020614589.1, uncharacterized protein LOC110052763 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap8.224.1.5f15e58b

atgggatttaaattttataaacagaaatttttggaacaacctgaaccattgtgcagcatgttgggtgaggccaaaaaggagaagtggaaacgtattcgtaacaccttgacaccagcttttagtgggctaaaaatgaagcagatggttcctctgatgaatgcctgctgtgacaatttggtcaagaaacttggtgaagttgctgacaaagagaaaagcattaatattcataaatttcaacagtgtattacaatggatgtcattgtttctgctggttttggccttcaagtggattcacaaaataatcctgacgaccctgtcctaaaagcagtgcagcgctccatgaaacagacaacttttcagcaaattgtactgacgattttattcttgatgccttttgggaaaaaaatcttggaaaaagtgccaagattgtggatgtcaaatttaatacctattataaacattggagaggaaatagttcgcaccaagagaacaaatgctgggagctcaacaaaaaaggacatgttggacctaatgctggctgcctcagatgacccttcagtcccagagtctaagaagctcacagacatggaagtcattgcacaaagcattttctttctgtcagcaggggttgaaacctccggtaccactttaagttttgtgtgtcaccatttagcaacaagtcctgaaattcaggacaaagtgcaacaagagatagacgctgtgtggccagacgaaagtgaaatcctgtcttatgagttagttcagcaaatgccatatcttgacatggtaatatcagaagttctgagactttatcctccaggatttattatggctcgtgcctgtacacaagagtgcgtcttgaaggggataaagatacctgaaggtttaacagttgtgataccagcatacagcattcaccgagacccatccatttatcccaaccctgacgtgtttgacccagagcgcttttcagcatcagccaagctgtcacgtgatccatacacatatctgccatttggtcacggtccacataactgcgtcggtatgcggtttgctcagatggaaatgagactagtgttggcgcgaatgttgaagaagtatcgcttggaagtgtctccagacacgaagattccacccgaagttatcgtaaaagccaccttgacttgtggagatgttaacattcgggtagtgtcacggaacaatttctacacatatgactgggatacaagcgcactggtgtctgtcagtgtgggcaaacaaacaacccattatacttacaactctgacggcgaccttacaagtattgcctaccccacttcaactaccgtcagatactcctggaaccgacatggactcctgggtaacataacaggttttaaccaggataacaagttaatacagggagcgtacttctcgtacgactggaatggtaaggttactatgtccagatttcctcaaggcgactcggccgtgctcgtgtttaatgaagaagcgagcatgatggatatagtcggcggtggttttagtgatgtacgattcgaaagtgttcaaaatgatgaccaggttgtgcgaatcataaagcaaggagaccaggttttgatgaacagaacgttcaacgaaaagacgaatatcatgtctgtagttgacgccaacgaccacgaaacagagttcctcttgcggaaagatggagaggtcctaaacacaacagatccagatggctacgtttatcagaatatttatgatgacaaagacaaactgatcaagtttaaatacccggatggcaagaccgaactcactgactatgacagcttcgggagactggtgcagttcactggtagatctgggaaggaagtaaagttcgagtacgatgagaatgacagaattgtcaaaaaagatgttgatgatcttggctcttcgtatttccttcatgatgacaacggaaacatcattcaagcaacgaacgatatcggaaaaattaacattgcttttgacaaagaaaacagaccatccagcgtcacttatccaaatggtcagcggatcacttacaaattcaatgatttccaaaggcgcgtggcactaaacgtcactgggctaagcctggcttacaagtatgaccggttttaccggttatcggaagtcgtacgtatagacccgagtggcagaggtgacgtcctattgaaattagaatacaattcacaagggttggtatctaaacgtgttcttggaaatggagcttattctgaatacgttttagatccagttaacttcaaactgttgcgaatggtgaattattttccgaatggaagcatttcttcttattttgagtataattatgataagaaagggcgtatcattcaacgaaatacaacatcagggaactggcattacaaatacgatgcagcttcgcagctgatagaatcaacggatccacaaggaaatgttgttcgttacgcctacgacaaaagaaaaaacagagtttttgtatcacaagagcctggtaacaagacgctgtacgctgcaaacgaagttaaccagtacaccacggcaggagattacgatattaaatatgacatgaatggaaacatggaggagaagtcaaacagagatgtacggaatgatagtgtcaaattcaagttcagtgccgaggatttcttgatgcaggccgaaactccgaacaaaagatgtaactttgtatacgatagcttggaaaacttgtataagaagacatgcggtcaaacggaggtccagttcataatcgatccatttgggaatccaggtgcggatattgttggcaagatttctggtggaaatgtaacacactttgtccactgtgaagatcttggattggtggctttgattgacgtgaatggagatttgtattattacgagtttgacggtctagggtctgtcgtaggagtactgggtcccagtggtgatcgtgtcaatcgctacagttatgacccttttggcagaatggtggaatttgatgaacatttgccacaggacttcacgtttattggtcaatggggagtgactgctgaccgtgaactaaaggatatctactggatgagatccagacactatgatgcacagcttggaagatttcttagcattgatccccttggtttttcagggaaaagtatcaatctttactcgtacgctgccaacaatcccgtgatgcttaaggacccgcgagggcgttgtctttcctttgctactgtggccgggggtcccctgggggctgtctttaacgcaatgacgaatgttggtgcttacgttaccgctcagagaataaataatcagaaagtttccattggaggagttatatcaagcgcaataaccggtgctgtcttgtcttattttaaaaagtacaaaattgtggtcgggtttgccgttaacgccggaggctctataatacgtcaagggattgataatggtcgcgttgactggggagaggtattggacgatgcaggcaaaggagcactttcctcattcggcggtgactcaggaggatgtaaacagttgatgaaggaccttatggctgattttagtgacaagaccatgaaaaaccttattgtgtcaccattatataacgcggcaaaggaaatcatcagttttaccatcagttgggtgcaatcctgggatccgaatgacatgattggtcctccgggatacggagacgcccgcttcatttcagtgaagacgccgctgaactataggatcaggtttgagaacgatcctaatgcgacagctcctgcgcaacacgtgatcattctacacacactggatcaagacttagacattcgcacatttagaatcacaggatttgggtttggcagctttaataaaaagctgaccaatacaagagcttctcttcaggaaacaatcgacctcgtgtcggagaagaacatttacctccgagtgctagctgggatagatatcatgactcgtgaagcacgctgggaatttcaaagcctcgatcctcagacaggcgaggctcctgatgatccactgacaggctttcttccaccgaacaatgggacgacaggtcaaggatatgtgactttcactgtaagcctgaagaagaacttgccatctttagcaaggattgatgcgcaggctagcatctatttcgacaagaacgaaccgatcgacactcctccaatctttaacacgattgacagttcaagcccttcctcaaatatatctgttgtaagtgacgtcatgaaggttggaaaactggcggtggatatcgattcacgagacgaggggtctggggtccagtctgttgacatattttaccaaatctcagagggtaatgatccgctccgacaagaatctctacttcccctactgtccggcataacaggcgaaacaacgttcctgcccctccccccagggaagacgtacacacttctggctttggcttttgatcacgtgggtaacaggcagccaatggacttgaatcgagcgatcacagtggactttacaattcctaaaccttcctgtaaaaggctgaacaactgctccagccatggaaattgctccgttctcaatttctgtgtctgtgaagatggattctatggggctaactgctcatttgattttcctctacgttttgacactccggtcatcaacgtaatgtacagtgacacttctgaagacaagccagctcagctatatctgtccgcttttattccggattttgacaacagcagctacaatggcaatttcaccctgaaactcttcatcgatgatgttccgcagggattcactttcaataaaggaaaccagactgggaatcgtgtcgtgttggaacgtgaagatttcggtgatattaggatgacgcctaaaaaggacttttcaggactcgtcaagttaaacatcactgcgcaaggcgcaacgccaagggaaacaaaagtggccagcaaccaaattaaaatgaagatcgaagccgttgctgacatcccgtctctcaatgtcagtgtaccttgttatgactggaacagcagcaaaaagattatacccgtctcttttgaaagccacctaaatgatcgagatggttcggagaatctgacttttatcttctcgggtttaccgagtggttatcgatcagttcacgaaaatgtcacgaagtctgtgaacggaagtaataatacagctcctcaaagctcgactggttggtttatttcatttaacgggacgttgaaaccattccttctgagtgtaatcgccatagctgaagaaagatctaatggagacaaagcaaacaaaaccgttactgttgatgtgctattttgtgttacttgcgaggcgctaaataactgctccagacatggaagatgcagcaaagtaaatacttgcgattgtgaaagtggatttaaaggatccctggattgttcaacggtttcctgtgaaaaggtgagcaactgctctggacatggaaactgcactggcccaaacacgtgtgtttgtcaaagcggatttaaaagtgtaggctgctcagaagtttcttgcgagttagtgaatcactgttcaggtcgtggtgtctgtactggacctaatgtgtgttcttgccatagcggattcaaaggaaataactgcacggaagtctcttgtgaagcgttaaacgactgttcaaatcacggaaactgcaccggaccaaacgaatgcacttgtgaaaaaggatttcgatctgaagcaaattgctctaaagtctcgtgtgaatcactggattactgttcatataacggtgactgtaccggacctaatatctgttcatgccacagtggatttaaaggactaaactgttcagaaggtatttaa

Transcript

evm.model.Ap8.224.1.5f15e58b

ATGACTTAAATGGGATTTAAATTTTATAAACAGAAATTTTTGGAACAACCTGAACCATTGTGCAGCATGTTGGGTGAGGCCAAAAAGGAGAAGTGGAAACGTATTCGTAACACCTTGACACCAGCTTTTAGTGGGCTAAAAATGAAGCAGATGGTTCCTCTGATGAATGCCTGCTGTGACAATTTGGTCAAGAAACTTGGTGAAGTTGCTGACAAAGAGAAAAGCATTAATATTCATAAATTTCAACAGTGTATTACAATGGATGTCATTGTTTCTGCTGGTTTTGGCCTTCAAGTGGATTCACAAAATAATCCTGACGACCCTGTCCTAAAAGCAGTGCAGCGCTCCATGAAACAGACAACTTTTCAGCAAATTGTACTGACGATTTTATTCTTGATGCCTTTTGGGAAAAAAATCTTGGAAAAAGTGCCAAGATTGTGGATGTCAAATTTAATACCTATTATAAACATTGGAGAGGAAATAGTTCGCACCAAGAGAACAAATGCTGGGAGCTCAACAAAAAAGGACATGTTGGACCTAATGCTGGCTGCCTCAGATGACCCTTCAGTCCCAGAGTCTAAGAAGCTCACAGACATGGAAGTCATTGCACAAAGCATTTTCTTTCTGTCAGCAGGGGTTGAAACCTCCGGTACCACTTTAAGTTTTGTGTGTCACCATTTAGCAACAAGTCCTGAAATTCAGGACAAAGTGCAACAAGAGATAGACGCTGTGTGGCCAGACGAAAGTGAAATCCTGTCTTATGAGTTAGTTCAGCAAATGCCATATCTTGACATGGTAATATCAGAAGTTCTGAGACTTTATCCTCCAGGATTTATTATGGCTCGTGCCTGTACACAAGAGTGCGTCTTGAAGGGGATAAAGATACCTGAAGGTTTAACAGTTGTGATACCAGCATACAGCATTCACCGAGACCCATCCATTTATCCCAACCCTGACGTGTTTGACCCAGAGCGCTTTTCAGCATCAGCCAAGCTGTCACGTGATCCATACACATATCTGCCATTTGGTCACGGTCCACATAACTGCGTCGGTATGCGGTTTGCTCAGATGGAAATGAGACTAGTGTTGGCGCGAATGTTGAAGAAGTATCGCTTGGAAGTGTCTCCAGACACGAAGATTCCACCCGAAGTTATCGTAAAAGCCACCTTGACTTGTGGAGATGTTAACATTCGGGTAGTGTCACGGAACAATTTCTACACATATGACTGGGATACAAGCGCACTGGTGTCTGTCAGTGTGGGCAAACAAACAACCCATTATACTTACAACTCTGACGGCGACCTTACAAGTATTGCCTACCCCACTTCAACTACCGTCAGATACTCCTGGAACCGACATGGACTCCTGGGTAACATAACAGGTTTTAACCAGGATAACAAGTTAATACAGGGAGCGTACTTCTCGTACGACTGGAATGGTAAGGTTACTATGTCCAGATTTCCTCAAGGCGACTCGGCCGTGCTCGTGTTTAATGAAGAAGCGAGCATGATGGATATAGTCGGCGGTGGTTTTAGTGATGTACGATTCGAAAGTGTTCAAAATGATGACCAGGTTGTGCGAATCATAAAGCAAGGAGACCAGGTTTTGATGAACAGAACGTTCAACGAAAAGACGAATATCATGTCTGTAGTTGACGCCAACGACCACGAAACAGAGTTCCTCTTGCGGAAAGATGGAGAGGTCCTAAACACAACAGATCCAGATGGCTACGTTTATCAGAATATTTATGATGACAAAGACAAACTGATCAAGTTTAAATACCCGGATGGCAAGACCGAACTCACTGACTATGACAGCTTCGGGAGACTGGTGCAGTTCACTGGTAGATCTGGGAAGGAAGTAAAGTTCGAGTACGATGAGAATGACAGAATTGTCAAAAAAGATGTTGATGATCTTGGCTCTTCGTATTTCCTTCATGATGACAACGGAAACATCATTCAAGCAACGAACGATATCGGAAAAATTAACATTGCTTTTGACAAAGAAAACAGACCATCCAGCGTCACTTATCCAAATGGTCAGCGGATCACTTACAAATTCAATGATTTCCAAAGGCGCGTGGCACTAAACGTCACTGGGCTAAGCCTGGCTTACAAGTATGACCGGTTTTACCGGTTATCGGAAGTCGTACGTATAGACCCGAGTGGCAGAGGTGACGTCCTATTGAAATTAGAATACAATTCACAAGGGTTGGTATCTAAACGTGTTCTTGGAAATGGAGCTTATTCTGAATACGTTTTAGATCCAGTTAACTTCAAACTGTTGCGAATGGTGAATTATTTTCCGAATGGAAGCATTTCTTCTTATTTTGAGTATAATTATGATAAGAAAGGGCGTATCATTCAACGAAATACAACATCAGGGAACTGGCATTACAAATACGATGCAGCTTCGCAGCTGATAGAATCAACGGATCCACAAGGAAATGTTGTTCGTTACGCCTACGACAAAAGAAAAAACAGAGTTTTTGTATCACAAGAGCCTGGTAACAAGACGCTGTACGCTGCAAACGAAGTTAACCAGTACACCACGGCAGGAGATTACGATATTAAATATGACATGAATGGAAACATGGAGGAGAAGTCAAACAGAGATGTACGGAATGATAGTGTCAAATTCAAGTTCAGTGCCGAGGATTTCTTGATGCAGGCCGAAACTCCGAACAAAAGATGTAACTTTGTATACGATAGCTTGGAAAACTTGTATAAGAAGACATGCGGTCAAACGGAGGTCCAGTTCATAATCGATCCATTTGGGAATCCAGGTGCGGATATTGTTGGCAAGATTTCTGGTGGAAATGTAACACACTTTGTCCACTGTGAAGATCTTGGATTGGTGGCTTTGATTGACGTGAATGGAGATTTGTATTATTACGAGTTTGACGGTCTAGGGTCTGTCGTAGGAGTACTGGGTCCCAGTGGTGATCGTGTCAATCGCTACAGTTATGACCCTTTTGGCAGAATGGTGGAATTTGATGAACATTTGCCACAGGACTTCACGTTTATTGGTCAATGGGGAGTGACTGCTGACCGTGAACTAAAGGATATCTACTGGATGAGATCCAGACACTATGATGCACAGCTTGGAAGATTTCTTAGCATTGATCCCCTTGGTTTTTCAGGGAAAAGTATCAATCTTTACTCGTACGCTGCCAACAATCCCGTGATGCTTAAGGACCCGCGAGGGCGTTGTCTTTCCTTTGCTACTGTGGCCGGGGGTCCCCTGGGGGCTGTCTTTAACGCAATGACGAATGTTGGTGCTTACGTTACCGCTCAGAGAATAAATAATCAGAAAGTTTCCATTGGAGGAGTTATATCAAGCGCAATAACCGGTGCTGTCTTGTCTTATTTTAAAAAGTACAAAATTGTGGTCGGGTTTGCCGTTAACGCCGGAGGCTCTATAATACGTCAAGGGATTGATAATGGTCGCGTTGACTGGGGAGAGGTATTGGACGATGCAGGCAAAGGAGCACTTTCCTCATTCGGCGGTGACTCAGGAGGATGTAAACAGTTGATGAAGGACCTTATGGCTGATTTTAGTGACAAGACCATGAAAAACCTTATTGTGTCACCATTATATAACGCGGCAAAGGAAATCATCAGTTTTACCATCAGTTGGGTGCAATCCTGGGATCCGAATGACATGATTGGTCCTCCGGGATACGGAGACGCCCGCTTCATTTCAGTGAAGACGCCGCTGAACTATAGGATCAGGTTTGAGAACGATCCTAATGCGACAGCTCCTGCGCAACACGTGATCATTCTACACACACTGGATCAAGACTTAGACATTCGCACATTTAGAATCACAGGATTTGGGTTTGGCAGCTTTAATAAAAAGCTGACCAATACAAGAGCTTCTCTTCAGGAAACAATCGACCTCGTGTCGGAGAAGAACATTTACCTCCGAGTGCTAGCTGGGATAGATATCATGACTCGTGAAGCACGCTGGGAATTTCAAAGCCTCGATCCTCAGACAGGCGAGGCTCCTGATGATCCACTGACAGGCTTTCTTCCACCGAACAATGGGACGACAGGTCAAGGATATGTGACTTTCACTGTAAGCCTGAAGAAGAACTTGCCATCTTTAGCAAGGATTGATGCGCAGGCTAGCATCTATTTCGACAAGAACGAACCGATCGACACTCCTCCAATCTTTAACACGATTGACAGTTCAAGCCCTTCCTCAAATATATCTGTTGTAAGTGACGTCATGAAGGTTGGAAAACTGGCGGTGGATATCGATTCACGAGACGAGGGGTCTGGGGTCCAGTCTGTTGACATATTTTACCAAATCTCAGAGGGTAATGATCCGCTCCGACAAGAATCTCTACTTCCCCTACTGTCCGGCATAACAGGCGAAACAACGTTCCTGCCCCTCCCCCCAGGGAAGACGTACACACTTCTGGCTTTGGCTTTTGATCACGTGGGTAACAGGCAGCCAATGGACTTGAATCGAGCGATCACAGTGGACTTTACAATTCCTAAACCTTCCTGTAAAAGGCTGAACAACTGCTCCAGCCATGGAAATTGCTCCGTTCTCAATTTCTGTGTCTGTGAAGATGGATTCTATGGGGCTAACTGCTCATTTGATTTTCCTCTACGTTTTGACACTCCGGTCATCAACGTAATGTACAGTGACACTTCTGAAGACAAGCCAGCTCAGCTATATCTGTCCGCTTTTATTCCGGATTTTGACAACAGCAGCTACAATGGCAATTTCACCCTGAAACTCTTCATCGATGATGTTCCGCAGGGATTCACTTTCAATAAAGGAAACCAGACTGGGAATCGTGTCGTGTTGGAACGTGAAGATTTCGGTGATATTAGGATGACGCCTAAAAAGGACTTTTCAGGACTCGTCAAGTTAAACATCACTGCGCAAGGCGCAACGCCAAGGGAAACAAAAGTGGCCAGCAACCAAATTAAAATGAAGATCGAAGCCGTTGCTGACATCCCGTCTCTCAATGTCAGTGTACCTTGTTATGACTGGAACAGCAGCAAAAAGATTATACCCGTCTCTTTTGAAAGCCACCTAAATGATCGAGATGGTTCGGAGAATCTGACTTTTATCTTCTCGGGTTTACCGAGTGGTTATCGATCAGTTCACGAAAATGTCACGAAGTCTGTGAACGGAAGTAATAATACAGCTCCTCAAAGCTCGACTGGTTGGTTTATTTCATTTAACGGGACGTTGAAACCATTCCTTCTGAGTGTAATCGCCATAGCTGAAGAAAGATCTAATGGAGACAAAGCAAACAAAACCGTTACTGTTGATGTGCTATTTTGTGTTACTTGCGAGGCGCTAAATAACTGCTCCAGACATGGAAGATGCAGCAAAGTAAATACTTGCGATTGTGAAAGTGGATTTAAAGGATCCCTGGATTGTTCAACGGTTTCCTGTGAAAAGGTGAGCAACTGCTCTGGACATGGAAACTGCACTGGCCCAAACACGTGTGTTTGTCAAAGCGGATTTAAAAGTGTAGGCTGCTCAGAAGTTTCTTGCGAGTTAGTGAATCACTGTTCAGGTCGTGGTGTCTGTACTGGACCTAATGTGTGTTCTTGCCATAGCGGATTCAAAGGAAATAACTGCACGGAAGTCTCTTGTGAAGCGTTAAACGACTGTTCAAATCACGGAAACTGCACCGGACCAAACGAATGCACTTGTGAAAAAGGATTTCGATCTGAAGCAAATTGCTCTAAAGTCTCGTGTGAATCACTGGATTACTGTTCATATAACGGTGACTGTACCGGACCTAATATCTGTTCATGCCACAGTGGATTTAAAGGACTAAACTGTTCAGAAGGTATTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P24463	Cytochrome P450 3A12 OS=Canis lupus familiaris OX=9615 GN=CYP3A12 PE=2 SV=1
P05183	Cytochrome P450 3A2 OS=Rattus norvegicus OX=10116 GN=Cyp3a2 PE=1 SV=2
P04800	Cytochrome P450 3A1 OS=Rattus norvegicus OX=10116 GN=Cyp3a1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001664 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05593 all species →	RHS_repeat	RHS Repeat	Repeat	Interproscan
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR002403 all species →	Family	Cytochrome P450, E-class, group IV	Interproscan
IPR031325 all species →	Repeat	RHS repeat	Interproscan
IPR006530 all species →	Repeat	YD repeat	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR017972 all species →	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR022385 all species →	Domain	Rhs repeat-associated core	Interproscan
IPR050705 all species →	Family	Cytochrome P450 3A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24302 all species →	CYTOCHROME P450 FAMILY 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0008395 all species →	Molecular Function	steroid hydroxylase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap8.224.1.5f15e58b.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.