Detailed information of evm.model.Ap8.233 in Astrangia poculata

Genomic Location: Ap8:2330356...2336666
NR annotation: XP_020614595.1, 60S ribosomal protein L35a-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9USX4Large ribosomal subunit protein eL33A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl35b PE=1 SV=2
Q9USG6Large ribosomal subunit protein eL33B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl35a PE=1 SV=1
P05744Large ribosomal subunit protein eL33A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL33A PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007369 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01247
all species →		Ribosomal_L35AeRibosomal protein L35AeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018266
all species →		Conserved_siteLarge ribosomal subunit protein eL33, conserved siteInterproscan
IPR009000
all species →		Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR001780
all species →		FamilyLarge ribosomal subunit protein eL33Interproscan
IPR038661
all species →		Homologous_superfamilyLarge ribosomal subunit protein eL33 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10902
all species →		60S RIBOSOMAL PROTEIN L35AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0002181
all species →		Biological Processcytoplasmic translationInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0042273
all species →		Biological Processribosomal large subunit biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.233.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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