Detailed information of evm.model.Ap8.2492 in Astrangia poculata

Genomic Location: Ap8:27188454...27197082
NR annotation: PFX16614.1, Protein NLRC3 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
E9Q5R7NACHT, LRR and PYD domains-containing protein 12 OS=Mus musculus OX=10090 GN=Nlrp12 PE=1 SV=1
P59046NACHT, LRR and PYD domains-containing protein 12 OS=Homo sapiens OX=9606 GN=NLRP12 PE=1 SV=2
B0FPE9NACHT, LRR and PYD domains-containing protein 3 OS=Macaca mulatta OX=9544 GN=NLRP3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000067 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729
all species →		NACHTNACHT domainDomainInterproscan
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF01048
all species →		PNP_UDP_1Phosphorylase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035994
all species →		Homologous_superfamilyNucleoside phosphorylase superfamilyInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR052394
all species →		FamilyLeucine-rich repeat-containing proteinInterproscan
IPR000845
all species →		DomainNucleoside phosphorylase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24114
all species →		LEUCINE RICH REPEAT FAMILY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0009116
all species →		Biological Processnucleoside metabolic processInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.2492.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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