Detailed information of evm.model.Ap8.2498 in Astrangia poculata

Genomic Location: Ap8:27243839...27253880
NR annotation: XP_027047712.1, protein maelstrom homolog [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08D62Protein maelstrom homolog OS=Xenopus tropicalis OX=8364 GN=mael PE=2 SV=1
Q4R786Protein maelstrom homolog OS=Macaca fascicularis OX=9541 GN=MAEL PE=2 SV=1
Q96JY0Protein maelstrom homolog OS=Homo sapiens OX=9606 GN=MAEL PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006787 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13017
all species →		MaelstrompiRNA pathway germ-plasm componentFamilyInterproscan
PF09011
all species →		HMG_box_2HMG-box domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039259
all species →		FamilyProtein maelstromInterproscan
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR024970
all species →		DomainMaelstrom domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21358
all species →		PROTEIN MAELSTROM HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0007140
all species →		Biological Processmale meiotic nuclear divisionInterproscan
GO:0007283
all species →		Biological ProcessspermatogenesisInterproscan
GO:0034587
all species →		Biological ProcesspiRNA processingInterproscan
GO:0043186
all species →		Cellular ComponentP granuleInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045892
all species →		Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0060964
all species →		Biological Processregulation of miRNA-mediated gene silencingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.2498.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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