Detailed information of evm.model.Ap8.2608 in Astrangia poculata

Genomic Location: Ap8:28499793...28510888
NR annotation: XP_020603002.1, EF-hand domain-containing family member C2-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32TG3EF-hand domain-containing family member C2 OS=Gallus gallus OX=9031 GN=EFHC2 PE=2 SV=1
Q32TF8EF-hand domain-containing family member C2 OS=Danio rerio OX=7955 GN=efhc2 PE=2 SV=2
Q5JST6EF-hand domain-containing family member C2 OS=Homo sapiens OX=9606 GN=EFHC2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001941 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06565
all species →		DM10_domDM10 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006602
all species →		DomainDM10 domainInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR040193
all species →		FamilyEF-hand domain-containing protein EFHC1/EFHC2/EFHBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12086
all species →		EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0000281
all species →		Biological Processmitotic cytokinesisInterproscan
GO:0005874
all species →		Cellular ComponentmicrotubuleInterproscan
GO:0005930
all species →		Cellular ComponentaxonemeInterproscan
GO:0007052
all species →		Biological Processmitotic spindle organizationInterproscan
GO:0010975
all species →		Biological Processregulation of neuron projection developmentInterproscan
GO:0043014
all species →		Molecular Functionalpha-tubulin bindingInterproscan
GO:0060285
all species →		Biological Processcilium-dependent cell motilityInterproscan
GO:0072686
all species →		Cellular Componentmitotic spindleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.2608.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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