Detailed information of evm.model.Ap8.2614.1.5f15e8a2 in Astrangia poculata

Genomic Location: Ap8:28640721...28647315
NR annotation: KAJ7330687.1, DDB1- and CUL4-associated factor 8 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NRH1DDB1- and CUL4-associated factor 8 OS=Xenopus laevis OX=8355 GN=dcaf8 PE=2 SV=1
Q5U2M6DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1
Q28I90DDB1- and CUL4-associated factor 8 OS=Xenopus tropicalis OX=8364 GN=dcaf8 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003164 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR045151
all species →		FamilyDDB1- and CUL4-associated factor 8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15574
all species →		WD REPEAT DOMAIN-CONTAINING FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0080008
all species →		Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11804DCAF8; DDB1- and CUL4-associated factor 8-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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