Gene detail

Detailed information of evm.model.Ap8.2617 in Astrangia poculata

Genomic Location: Ap8:28669326...28683034
NR annotation: XP_022806546.1, intraflagellar transport protein 57 homolog isoform X1 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BXG3	Intraflagellar transport protein 57 homolog OS=Mus musculus OX=10090 GN=Ift57 PE=1 SV=1
Q5EA95	Intraflagellar transport protein 57 homolog OS=Bos taurus OX=9913 GN=IFT57 PE=1 SV=1
A9ULY7	Intraflagellar transport protein 57 homolog OS=Xenopus laevis OX=8355 GN=ift57 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005268 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10498 all species →	IFT57	Intra-flagellar transport protein 57	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019530 all species →	Family	Intra-flagellar transport protein 57	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16011 all species →	IFT57/HIPPI	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0030992 all species →	Cellular Component	intraciliary transport particle B	Interproscan
GO:0042073 all species →	Biological Process	intraciliary transport	Interproscan
GO:1905515 all species →	Biological Process	non-motile cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04638	IFT57, HIPPI, ESRRBL1; intraflagellar transport protein 57	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.