Detailed information of evm.model.Ap8.2676 in Astrangia poculata

Genomic Location: Ap8:29252003...29252909
NR annotation: XP_020614529.1, calmodulin-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P1584520 kDa calcium-binding protein OS=Schistosoma mansoni OX=6183 GN=SM20 PE=2 SV=2
Q09665Troponin C, isoform 2 OS=Caenorhabditis elegans OX=6239 GN=tnc-2 PE=2 SV=1
P47948Troponin C, isoform 2 OS=Drosophila melanogaster OX=7227 GN=TpnC47D PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011187 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →		EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050403
all species →		FamilyMyosin Regulatory Light ChainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23049
all species →		MYOSIN REGULATORY LIGHT CHAIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02183CALM; calmodulin-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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