Detailed information of evm.model.Ap8.2762 in Astrangia poculata

Genomic Location: Ap8:29876028...29880957
NR annotation: XP_020614014.1, zinc finger and SCAN domain-containing protein 22-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011487 (this species only)
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13912
all species →		zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF12171
all species →		zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR022755
all species →		DomainZinc finger, double-stranded RNA bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24381
all species →		ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0001227
all species →		Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.2762.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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