Detailed information of evm.model.Ap8.376 in Astrangia poculata

Genomic Location: Ap8:3989555...4017228
NR annotation: PFX12980.1, hypothetical protein AWC38_SpisGene22983 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DE95Cullin-3-A OS=Xenopus laevis OX=8355 GN=cul3a PE=1 SV=1
Q6GPF3Cullin-3-B OS=Xenopus laevis OX=8355 GN=cul3b PE=1 SV=1
Q13618Cullin-3 OS=Homo sapiens OX=9606 GN=CUL3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000035 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|Cullin · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00888
all species →		CullinCullin familyRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR016159
all species →		Homologous_superfamilyCullin repeat-like-containing domain superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR001373
all species →		DomainCullin, N-terminalInterproscan
IPR000305
all species →		DomainGIY-YIG endonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47243
all species →		SIALOADHESINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005769
all species →		Cellular Componentearly endosomeInterproscan
GO:0005770
all species →		Cellular Componentlate endosomeInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0046790
all species →		Molecular Functionvirion bindingInterproscan
GO:0075512
all species →		Biological Processclathrin-dependent endocytosis of virus by host cellInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031625
all species →		Molecular Functionubiquitin protein ligase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.376.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP