Detailed information of evm.model.Ap8.463 in Astrangia poculata

Genomic Location: Ap8:4939053...4959698
NR annotation: XP_020611908.1, histone-lysine N-methyltransferase 2A-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03164Histone-lysine N-methyltransferase 2A OS=Homo sapiens OX=9606 GN=KMT2A PE=1 SV=5
P55200Histone-lysine N-methyltransferase 2A OS=Mus musculus OX=10090 GN=Kmt2a PE=1 SV=3
Q24742Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis OX=7244 GN=trx PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004602 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF02008
all species →		zf-CXXCCXXC zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR036427
all species →		Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR002857
all species →		DomainZinc finger, CXXC-typeInterproscan
IPR034732
all species →		DomainExtended PHD (ePHD) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45838
all species →		HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0035097
all species →		Cellular Componenthistone methyltransferase complexInterproscan
GO:0042800
all species →		Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0045893
all species →		Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0051568
all species →		Biological Processobsolete histone H3-K4 methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.463.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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