Detailed information of evm.model.Ap8.671 in Astrangia poculata

Genomic Location: Ap8:7240138...7245828
NR annotation: CAB4000242.1, ATP-dependent DNA helicase PIF1 [Paramuricea clavata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H611ATP-dependent DNA helicase PIF1 OS=Homo sapiens OX=9606 GN=PIF1 PE=1 SV=2
Q0R4F1ATP-dependent DNA helicase PIF1 OS=Xenopus laevis OX=8355 GN=pif1 PE=2 SV=1
Q6MHJ5ATP-dependent DNA helicase Pif1 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=pif1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000098 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05970
all species →		PIF1PIF1-like helicaseFamilyInterproscan
PF21107
all species →		STPRsSTPRs (score and three amino acid peptide repeats)RepeatInterproscan
PF20209
all species →		DUF6570Domain of unknown function (DUF6570)DomainInterproscan
PF14214
all species →		Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051055
all species →		FamilyPIF1 DNA helicaseInterproscan
IPR010285
all species →		FamilyDNA helicase Pif1-likeInterproscan
IPR048998
all species →		DomainSTPR domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR046700
all species →		DomainDomain of unknown function DUF6570Interproscan
IPR025476
all species →		DomainHelitron helicase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →		ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap8.671.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP