Gene detail

Detailed information of evm.model.Ap8.736 in Astrangia poculata

Genomic Location: Ap8:8045478...8060124
NR annotation: XP_020619491.1, uncharacterized protein LOC110057246 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap8.736

atgactgaggtgaaagacatcgacgccattgacgacattgtggagatgtgccgagtaatggcgtctcttgatgtttcgtccaaaggactctggacattggacgagatgaagccgggtaaaaaaaacgctgaaaatgtcgaagaaatccagggtggacggccaaggaggtgggttattcgtgctgaagcacgggattccatttcgcaaaatcaactccgacgaaagccaggcaatggcaaaagacctttattcgtggcaagaaggataagtgagagagaaggctcatcacacaacgttttggtggaaagattgcgtgacgacccaaagaacacagccgccttttctgtgttgactgaggctaagaaggaagatgagagaaaacgagccacattgcaccagttctatgaggatacggaagattgtttgaacagcatagacgacaaagtgcgaagtagtttggagaaaaacttaggaaacctacaagaaaaaattgctataaaaaaatgggatcttaaacagaaggaatacatcgtactcgttgcaggtgagacaagctctggaaagagtaccttgctgaatctgattcttggagagcaacttcttccttactctcatctcagcacaacgtccaccatctgcgagcttaaatacggaacgacgccgaaattagtggcgcactttaaagacagagattccgaaacaggactcaccgagaagactgtctggcttggtcagtcaacggaaacttctccacaaagttaccttgatgatatttcttcttttgttcacgtaaggacaaatcgagagaagggttctgattacaagaagattgaactgttttggccacacagcctgctgaaggtagaaaaactgattggcaacgccagaaatgcctctcttaagcagcagatggaactgatcggcgaaaacgctagttgtgtatcctttgaccaacaaaaggaatcatcagctactcgagctctgttcgtgtgcaacaagtgggaccaagtaccacaagcagaggctggtgcggtaaagaagtacatcattgaaaaactcacaaagcacttgccaactttggacccagattcccagatcatttacatgtcatccaccaaagccagtgaggcacaagatcttggagtaatcaccgacgaatttactggccttatgaatggtatcaagtccatggttttgaaaagtatcgaagcaagactacagactctatggaggtggcttgattacctcctttctcgtatggcttaccatgtcaaagcgttcattaccaattctcacaaagatcgttcaaaagttattgagaaaataacacttatcactaaacgcctcgcaaaacttgataaagagcagagttcagttggcaaggagcttcagcagcatctggaaaataaaacgaacaacgctgttagtacactgtctatgtacctcaagtcttctgatgtagtggaacaatttacttcgtggacgtcagatgatgttccaaacagtgatgacagttgggaggtgaccacaaattgtatccaaaaagcactgatgaagcgacttcaggacgtgatcgccgcgtgggaagaaaaacaccatgtctttgctgatgctcgcacttctctgatccagtatttccaagaacggtttaactttgttgagggacaacttcgaaatgtaaagacctccgttttggcagaggatgcttcaagtcgtgcaagtgttcccctggcagcagaggacttctccgtggccgaacgagttatcattggcgccacaagccccatttgggttccactcggcctgattgtcctgatagtcagcgtcccagtcgttggtgctatgctcatcaaagagaaattcgaagattggagcaaaacaagagggtacgaaaaagacaaatgtgggttcatggcgaaagcttccaaagaatatctaactgaagccgctgatgaacaaaatctgaggtcgtacgtggtggagcaactgaaagagtctcaagtttgtctcaagcaggttgtagctcgtatccctgagctcatcgaggctgaaaaaatgctatgtcaacagctaagagatgagaaaaggtcaaagaaagacatagaagatttgtatatacctttgtacgagagaagtttggagctgagggagcgcattgccttgttcggcatcaaagaagtacgcacaatgaacatccgctgtagcgatttggaatggatgaacgatggaagctcactccttggaacaggttcgtttgcttctgtctatcgagggaaattaaagcaccaaggaaaagaacaaaaagtggctttgaaagtctggaaagaggagctaaaagattctaacgcaagtgttttccttgctgaaacagaaacattgaggaagttgagttatcccctcattgtaaagttctatggtgcagcacttctaaaggaaggggatcagatgagggcgatactagtaatggagctgtgcaaagaaaacttgatgaaacacattttccagaatcctgagaatatacctggaatgccgtcctcaacagcttcaaccgacagaaatacaatccgatgggcgaaagaaattgctaatgctctaggatttgtacacggacaggggtttgttcacagggacctgaagttggaaaacatattgataacagaggggggtgttgtcaagatcgctgatgttggtgtagctaaacaagcaaagatggtcactggtaccatgaccggtacacctgcctacgttgcaccggaagtgatcagatcgagtgtgtacgatagcaaggcggatatatacagctttggcatcatgatgtgggagatgtggtatggaaagagggcctttcatgatgtaggaggagatttaaatacgttttttgacgaggtggccgaatgtgtcagaccttcccatgttgtgaacaggaaggggccctcagatggctggcagcagctgatgcaaaggtgctggaatggaaaagcggacgaacgaccaactgctgcgaaatgtcacaccgatttatccaagctgtaccagaaggcaacattggccatttga

Transcript

evm.model.Ap8.736

ATGACTGAGGTGAAAGACATCGACGCCATTGACGACATTGTGGAGATGTGCCGAGTAATGGCGTCTCTTGATGTTTCGTCCAAAGGACTCTGGACATTGGACGAGATGAAGCCGGGTAAAAAAAACGCTGAAAATGTCGAAGAAATCCAGGGTGGACGGCCAAGGAGGTGGGTTATTCGTGCTGAAGCACGGGATTCCATTTCGCAAAATCAACTCCGACGAAAGCCAGGCAATGGCAAAAGACCTTTATTCGTGGCAAGAAGGATAAGTGAGAGAGAAGGCTCATCACACAACGTTTTGGTGGAAAGATTGCGTGACGACCCAAAGAACACAGCCGCCTTTTCTGTGTTGACTGAGGCTAAGAAGGAAGATGAGAGAAAACGAGCCACATTGCACCAGTTCTATGAGGATACGGAAGATTGTTTGAACAGCATAGACGACAAAGTGCGAAGTAGTTTGGAGAAAAACTTAGGAAACCTACAAGAAAAAATTGCTATAAAAAAATGGGATCTTAAACAGAAGGAATACATCGTACTCGTTGCAGGTGAGACAAGCTCTGGAAAGAGTACCTTGCTGAATCTGATTCTTGGAGAGCAACTTCTTCCTTACTCTCATCTCAGCACAACGTCCACCATCTGCGAGCTTAAATACGGAACGACGCCGAAATTAGTGGCGCACTTTAAAGACAGAGATTCCGAAACAGGACTCACCGAGAAGACTGTCTGGCTTGGTCAGTCAACGGAAACTTCTCCACAAAGTTACCTTGATGATATTTCTTCTTTTGTTCACGTAAGGACAAATCGAGAGAAGGGTTCTGATTACAAGAAGATTGAACTGTTTTGGCCACACAGCCTGCTGAAGGTAGAAAAACTGATTGGCAACGCCAGAAATGCCTCTCTTAAGCAGCAGATGGAACTGATCGGCGAAAACGCTAGTTGTGTATCCTTTGACCAACAAAAGGAATCATCAGCTACTCGAGCTCTGTTCGTGTGCAACAAGTGGGACCAAGTACCACAAGCAGAGGCTGGTGCGGTAAAGAAGTACATCATTGAAAAACTCACAAAGCACTTGCCAACTTTGGACCCAGATTCCCAGATCATTTACATGTCATCCACCAAAGCCAGTGAGGCACAAGATCTTGGAGTAATCACCGACGAATTTACTGGCCTTATGAATGGTATCAAGTCCATGGTTTTGAAAAGTATCGAAGCAAGACTACAGACTCTATGGAGGTGGCTTGATTACCTCCTTTCTCGTATGGCTTACCATGTCAAAGCGTTCATTACCAATTCTCACAAAGATCGTTCAAAAGTTATTGAGAAAATAACACTTATCACTAAACGCCTCGCAAAACTTGATAAAGAGCAGAGTTCAGTTGGCAAGGAGCTTCAGCAGCATCTGGAAAATAAAACGAACAACGCTGTTAGTACACTGTCTATGTACCTCAAGTCTTCTGATGTAGTGGAACAATTTACTTCGTGGACGTCAGATGATGTTCCAAACAGTGATGACAGTTGGGAGGTGACCACAAATTGTATCCAAAAAGCACTGATGAAGCGACTTCAGGACGTGATCGCCGCGTGGGAAGAAAAACACCATGTCTTTGCTGATGCTCGCACTTCTCTGATCCAGTATTTCCAAGAACGGTTTAACTTTGTTGAGGGACAACTTCGAAATGTAAAGACCTCCGTTTTGGCAGAGGATGCTTCAAGTCGTGCAAGTGTTCCCCTGGCAGCAGAGGACTTCTCCGTGGCCGAACGAGTTATCATTGGCGCCACAAGCCCCATTTGGGTTCCACTCGGCCTGATTGTCCTGATAGTCAGCGTCCCAGTCGTTGGTGCTATGCTCATCAAAGAGAAATTCGAAGATTGGAGCAAAACAAGAGGGTACGAAAAAGACAAATGTGGGTTCATGGCGAAAGCTTCCAAAGAATATCTAACTGAAGCCGCTGATGAACAAAATCTGAGGTCGTACGTGGTGGAGCAACTGAAAGAGTCTCAAGTTTGTCTCAAGCAGGTTGTAGCTCGTATCCCTGAGCTCATCGAGGCTGAAAAAATGCTATGTCAACAGCTAAGAGATGAGAAAAGGTCAAAGAAAGACATAGAAGATTTGTATATACCTTTGTACGAGAGAAGTTTGGAGCTGAGGGAGCGCATTGCCTTGTTCGGCATCAAAGAAGTACGCACAATGAACATCCGCTGTAGCGATTTGGAATGGATGAACGATGGAAGCTCACTCCTTGGAACAGGTTCGTTTGCTTCTGTCTATCGAGGGAAATTAAAGCACCAAGGAAAAGAACAAAAAGTGGCTTTGAAAGTCTGGAAAGAGGAGCTAAAAGATTCTAACGCAAGTGTTTTCCTTGCTGAAACAGAAACATTGAGGAAGTTGAGTTATCCCCTCATTGTAAAGTTCTATGGTGCAGCACTTCTAAAGGAAGGGGATCAGATGAGGGCGATACTAGTAATGGAGCTGTGCAAAGAAAACTTGATGAAACACATTTTCCAGAATCCTGAGAATATACCTGGAATGCCGTCCTCAACAGCTTCAACCGACAGAAATACAATCCGATGGGCGAAAGAAATTGCTAATGCTCTAGGATTTGTACACGGACAGGGGTTTGTTCACAGGGACCTGAAGTTGGAAAACATATTGATAACAGAGGGGGGTGTTGTCAAGATCGCTGATGTTGGTGTAGCTAAACAAGCAAAGATGGTCACTGGTACCATGACCGGTACACCTGCCTACGTTGCACCGGAAGTGATCAGATCGAGTGTGTACGATAGCAAGGCGGATATATACAGCTTTGGCATCATGATGTGGGAGATGTGGTATGGAAAGAGGGCCTTTCATGATGTAGGAGGAGATTTAAATACGTTTTTTGACGAGGTGGCCGAATGTGTCAGACCTTCCCATGTTGTGAACAGGAAGGGGCCCTCAGATGGCTGGCAGCAGCTGATGCAAAGGTGCTGGAATGGAAAAGCGGACGAACGACCAACTGCTGCGAAATGTCACACCGATTTATCCAAGCTGTACCAGAAGGCAACATTGGCCATTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ZQ31	Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2
Q7T6X2	Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R826 PE=3 SV=2
Q54RR9	Probable serine/threonine-protein kinase DDB_G0282963 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0282963 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000357 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR26392 all species →	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap8.736.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.