Gene detail

Detailed information of evm.model.Ap9.1048 in Astrangia poculata

Genomic Location: Ap9:11136010...11169860
NR annotation: XP_027055156.1, LOW QUALITY PROTEIN: sporulation-specific protein 15-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap9.1048

gtgtctggaggagagttatttgaacgagtagcggatgctgattgcttgacagaaaaagaagcttcgttttacatgtaccaactgctacagggtctgcaatacatgcacatgaagaacattgtgcatctggatctgaagcctgagaacattgtgtgcgtcagcaaggatagctgggatattaaactgattgactttggcctggcgcaggagctcgttcagggggttcgaatgaaggcacttaaagggacccctgagtttatggctccagaagcagtgaattttgagaccatctcgttggctacagatatgtggagcgttggagtcatagcttatattcttcttagtggtttatcgccactgttgggagataatgacaatgagacacttgccaacgtcacagccgttgaatgggactttgaggacgaaagctttgacgtcatctcagaccaggcgaaagacttcatcgctcagttattggtgaaaaacgccaggaaacgaaacacagttaaacaaagtctagaacacgagtggatgaagaaaagtgcatcagctaacgcggttaaaattgacaccaaaaaactaaaacagtttttggccaagagaaggtggcagattcccagcttaagcgcatgcgccaatcattcagggctgctgactgatgacgaaatcctcgagaaatccgtcaacgccctggtggccgttcgccgattatccagcttgtcatctcttatgaatattaacagccgcccatccattgcgccgtccttagcgaccgtggcctctgtcgaggaaggggaggaagaagtaaaacctggagacgagggaatgcaagaaaataaagagcaggaacttgtcccaaacataaacgacaaagagaagattgctgtacaagagaacaacaagcaaatctcaatacagccaccagtattcacgaaagaattaagtgacatatcaatcaacgagggagaaacagtgtctttggaggtcggcatcgagaatgacgggtactgtcagctggaatggctcaagaatgacgtcacagttacagagggtcagcggatatcgcttctaaatcacggtgaaggcagatattcactcaccatccgggatactcaggatgatgactctggggagtactgctgcgtggttgagaacgaggctggaagggtcacgtgtactggaaaactatccatagaaccccaatccaaaagtgatgagactgaggaggaggatgaggaggagatcgacagttccatagaagttccagtcttcacgaaggaactccatgacgtcacagctaatgagcatgacactgttacacttgaggtgattgtcagcggtaactcggcctacgaattggagtggttcaaaaacgcggttgacattactgaaagcgaccgtatttccctggtgaaacgtgaagacgggcgattcacgctcaacatccgggactgcgaggatgacgacactggagagtattgttgtgtggctcagaacgaggctggaagggtcacatgtgctggctggcttactgttgaagttgaaagccttagatctgaggacgatgaagaaagcgaggagtcagaagacgaagacatatttgtgccaaaagagtttgttgagataagagaaggcgatgctcaaacctattactgtattgaagaagaggtcggcagaggcagatttggcatcgttaaaaggtgcgtggagctcgacactgccacacggttctgcgccaaaatcatcaaatcgaggccgagccagaaggaggagtttaaacgagagattgacgtcatgaatgctcttcaccatccgcgcatcatcagactgcaagacgcgtttgaggaaccaaggcagattatccttattttggaatatgcacgcggaggagatttattcgctcgtattgatggggattctctcccagagtttgaagccgtcaaaatactgaaacaagtattggacgctgtcaagtttatgcatgaccttggcttcatgcatctggacctcaagccacaaaatgtgatgttcaaaaatgaaggaggttcaaaaataaagctgattgatttcagtttgacaagacagtttgaccctcaacaagaaacgaaaatttcgtttgggactgctgagttcgtggctccagaaattgtcaactacgagccagtgacacttgctgcagatatgtgggcgattggcgtgatagcttatattatgttaagcggtgaatctccatttttgggtgaaagcgaggcggatacattctctcgcatcactgaagcacggtgggaattttctgacgtgtttgattacgtcagcaaggaggccaaagacttcataaagaggcttcttctcaaagatccgagaaaaaggttgacagttgacgagtgtctggagcatgactggatcaagggcgagctggctattgacgaaaattcgaatgatgtatccccaacagaaatgaagagacaagagagcagaaagtctgaggaacaagagctgccattggatgcaaagaaacttgagttaaagttaaagacaatactctccaaattacaaaacgctgagaaagaaagtcaagagctggaagaaaaacttcgtgacgaggaagaaagagctgatatactggaggatgagctacatgcgagcgagaattctagaaaagagttggaagaaaaggtttcgaaattggaaacagaaaagatagatctttcgaagaaagctaaagctaacagcgatgttttgaaaagagtggctgaaaccgaaggcgaaaaaagagctttggaggataaactctccgagcaaacaaaatctctaggaactttgtctcaaaaatataattcgctaaaagaaaagttggagaactatgatgtacttgaagaaaaggtgtatcttttggagcgagaaaggaaggaacacagagacacgaagcatcatctagaagacaaaattgaacgttttagtgtagaaaaggaggaattgatgcaaatgaacgagcaaaatgtcttagatcttgagaatgaagtttctaagctaaaagaggaaagagatacttttgaaaaacaatacatcactctgcgaagtgaaaaggaatctttggttgaggagcttacaaagcgattcggtgttttagatgaacagaaaaagttattaacacaagagaaaaatggtttggagacaaaagtgaaagcgtttgaaactgagaaaagcgaattaaagctcaagttagatagcaccgcccaagaagtgaaatgtttaaaagaaactgttaggcaacatgacgaagaaaaggacggagacgaaatggagaaagaattaacaaagatcaagaaacagaacgacgaagcaaagaaaacttgtgaagatttggcatcaaaactgagcaaagcgtacgcagaattagaacaagctaagccttcagtaaacaatgatggaacggcagtggatcgacagaaagacatttccactctgcaagaaaaggtgacgtcactggaaaaagaacgagaaaacttggaagacgatctggatgagagggaggctgaaattgatgaactgaaaaagaaaattgaacaactcgaaacgaacgccaaagagaaagacgatgaaattctgagttacaaatcaaagttagactctgtcaatgaggaattgaagacgttgcgggcgaaaaagaacgaggagaattcagaaaaagctaaagacgccgatgctgattttgacaaaaaagtcaacgattacaaatctgtggttgataagcttatgaaagaggttgcatcattgcaaggaaaactttctgcagcaaatcagaagaacaaagagttggaggaaaaggttacatcgagcacacaggaggtcgacgttctgctgactaaaatcgaagaatcttgtggcaaaacaacaaaggacaaattatcctctgatgtcgaaaattttaaactggaaatattgcggcttgaaggcgaaaacagaaagctgaaggaacttgctaatgacccgctgcttgcatcaacgcagaaaaaaatggaaactttacaagccatgaataatttcttaaaaagcgagaaagaagagttagtgctggaaatttccgccaaaaataagaaaattgagattttggagaggcgcgtgaaagagctgacggagatgagaacgagcgctgtgaatggatcgaaaaacggagtgtgcgacgaggctgatgcacagatcaatgaactggatgaagaactcggaaaaaccaaacacagagtagctgaactcgaggccgaacttgaacactctaacaacagcttcaactccagactgaggagagagttggatgaaatagaggcaaagtggactaaacgactcaggaaagagtgcatggaacttcagtcagagctgtcagagaaacacagcaaagagaaacaacactggcagaaaaaggaagtagaactacagaacataattcgtcaaatgaaaatcgtaatggacaaaaggctgggacaagcggaaactgaacggcggagactggaacaagaactgatgacgacaagaacgtctagtttccatggcagcatgattagcctcgactccaattcagacgattcagggggaattccatctcccaatccagggacaagcgctgacatcccttcgccgactgattgcctcagtgatcgcgagctaaggcgtgttgcatacaaactaaacggagaggagtggtctcaacttggaactttcctaggggtgggggacagggatcttgtgcagctcggaggtctcagcatggggccccaggagaaagcttttcgattgctgtgtgtttggaggacacgctgtcgactgagtcgatctcagatgatctcacagctggctgtgtcattggaggaagtgaatcgaaaagacgtcgctcagtttgttttggagcagttcatgtctggaaaacccagaaagaaactttttggatggtaa

Transcript

evm.model.Ap9.1048

TGTGTCTGGAGGAGAGTTATTTGAACGAGTAGCGGATGCTGATTGCTTGACAGAAAAAGAAGCTTCGTTTTACATGTACCAACTGCTACAGGGTCTGCAATACATGCACATGAAGAACATTGTGCATCTGGATCTGAAGCCTGAGAACATTGTGTGCGTCAGCAAGGATAGCTGGGATATTAAACTGATTGACTTTGGCCTGGCGCAGGAGCTCGTTCAGGGGGTTCGAATGAAGGCACTTAAAGGGACCCCTGAGTTTATGGCTCCAGAAGCAGTGAATTTTGAGACCATCTCGTTGGCTACAGATATGTGGAGCGTTGGAGTCATAGCTTATATTCTTCTTAGTGGTTTATCGCCACTGTTGGGAGATAATGACAATGAGACACTTGCCAACGTCACAGCCGTTGAATGGGACTTTGAGGACGAAAGCTTTGACGTCATCTCAGACCAGGCGAAAGACTTCATCGCTCAGTTATTGGTGAAAAACGCCAGGAAACGAAACACAGTTAAACAAAGTCTAGAACACGAGTGGATGAAGAAAAGTGCATCAGCTAACGCGGTTAAAATTGACACCAAAAAACTAAAACAGTTTTTGGCCAAGAGAAGGTGGCAGATTCCCAGCTTAAGCGCATGCGCCAATCATTCAGGGCTGCTGACTGATGACGAAATCCTCGAGAAATCCGTCAACGCCCTGGTGGCCGTTCGCCGATTATCCAGCTTGTCATCTCTTATGAATATTAACAGCCGCCCATCCATTGCGCCGTCCTTAGCGACCGTGGCCTCTGTCGAGGAAGGGGAGGAAGAAGTAAAACCTGGAGACGAGGGAATGCAAGAAAATAAAGAGCAGGAACTTGTCCCAAACATAAACGACAAAGAGAAGATTGCTGTACAAGAGAACAACAAGCAAATCTCAATACAGCCACCAGTATTCACGAAAGAATTAAGTGACATATCAATCAACGAGGGAGAAACAGTGTCTTTGGAGGTCGGCATCGAGAATGACGGGTACTGTCAGCTGGAATGGCTCAAGAATGACGTCACAGTTACAGAGGGTCAGCGGATATCGCTTCTAAATCACGGTGAAGGCAGATATTCACTCACCATCCGGGATACTCAGGATGATGACTCTGGGGAGTACTGCTGCGTGGTTGAGAACGAGGCTGGAAGGGTCACGTGTACTGGAAAACTATCCATAGAACCCCAATCCAAAAGTGATGAGACTGAGGAGGAGGATGAGGAGGAGATCGACAGTTCCATAGAAGTTCCAGTCTTCACGAAGGAACTCCATGACGTCACAGCTAATGAGCATGACACTGTTACACTTGAGGTGATTGTCAGCGGTAACTCGGCCTACGAATTGGAGTGGTTCAAAAACGCGGTTGACATTACTGAAAGCGACCGTATTTCCCTGGTGAAACGTGAAGACGGGCGATTCACGCTCAACATCCGGGACTGCGAGGATGACGACACTGGAGAGTATTGTTGTGTGGCTCAGAACGAGGCTGGAAGGGTCACATGTGCTGGCTGGCTTACTGTTGAAGTTGAAAGCCTTAGATCTGAGGACGATGAAGAAAGCGAGGAGTCAGAAGACGAAGACATATTTGTGCCAAAAGAGTTTGTTGAGATAAGAGAAGGCGATGCTCAAACCTATTACTGTATTGAAGAAGAGGTCGGCAGAGGCAGATTTGGCATCGTTAAAAGGTGCGTGGAGCTCGACACTGCCACACGGTTCTGCGCCAAAATCATCAAATCGAGGCCGAGCCAGAAGGAGGAGTTTAAACGAGAGATTGACGTCATGAATGCTCTTCACCATCCGCGCATCATCAGACTGCAAGACGCGTTTGAGGAACCAAGGCAGATTATCCTTATTTTGGAATATGCACGCGGAGGAGATTTATTCGCTCGTATTGATGGGGATTCTCTCCCAGAGTTTGAAGCCGTCAAAATACTGAAACAAGTATTGGACGCTGTCAAGTTTATGCATGACCTTGGCTTCATGCATCTGGACCTCAAGCCACAAAATGTGATGTTCAAAAATGAAGGAGGTTCAAAAATAAAGCTGATTGATTTCAGTTTGACAAGACAGTTTGACCCTCAACAAGAAACGAAAATTTCGTTTGGGACTGCTGAGTTCGTGGCTCCAGAAATTGTCAACTACGAGCCAGTGACACTTGCTGCAGATATGTGGGCGATTGGCGTGATAGCTTATATTATGTTAAGCGGTGAATCTCCATTTTTGGGTGAAAGCGAGGCGGATACATTCTCTCGCATCACTGAAGCACGGTGGGAATTTTCTGACGTGTTTGATTACGTCAGCAAGGAGGCCAAAGACTTCATAAAGAGGCTTCTTCTCAAAGATCCGAGAAAAAGGTTGACAGTTGACGAGTGTCTGGAGCATGACTGGATCAAGGGCGAGCTGGCTATTGACGAAAATTCGAATGATGTATCCCCAACAGAAATGAAGAGACAAGAGAGCAGAAAGTCTGAGGAACAAGAGCTGCCATTGGATGCAAAGAAACTTGAGTTAAAGTTAAAGACAATACTCTCCAAATTACAAAACGCTGAGAAAGAAAGTCAAGAGCTGGAAGAAAAACTTCGTGACGAGGAAGAAAGAGCTGATATACTGGAGGATGAGCTACATGCGAGCGAGAATTCTAGAAAAGAGTTGGAAGAAAAGGTTTCGAAATTGGAAACAGAAAAGATAGATCTTTCGAAGAAAGCTAAAGCTAACAGCGATGTTTTGAAAAGAGTGGCTGAAACCGAAGGCGAAAAAAGAGCTTTGGAGGATAAACTCTCCGAGCAAACAAAATCTCTAGGAACTTTGTCTCAAAAATATAATTCGCTAAAAGAAAAGTTGGAGAACTATGATGTACTTGAAGAAAAGGTGTATCTTTTGGAGCGAGAAAGGAAGGAACACAGAGACACGAAGCATCATCTAGAAGACAAAATTGAACGTTTTAGTGTAGAAAAGGAGGAATTGATGCAAATGAACGAGCAAAATGTCTTAGATCTTGAGAATGAAGTTTCTAAGCTAAAAGAGGAAAGAGATACTTTTGAAAAACAATACATCACTCTGCGAAGTGAAAAGGAATCTTTGGTTGAGGAGCTTACAAAGCGATTCGGTGTTTTAGATGAACAGAAAAAGTTATTAACACAAGAGAAAAATGGTTTGGAGACAAAAGTGAAAGCGTTTGAAACTGAGAAAAGCGAATTAAAGCTCAAGTTAGATAGCACCGCCCAAGAAGTGAAATGTTTAAAAGAAACTGTTAGGCAACATGACGAAGAAAAGGACGGAGACGAAATGGAGAAAGAATTAACAAAGATCAAGAAACAGAACGACGAAGCAAAGAAAACTTGTGAAGATTTGGCATCAAAACTGAGCAAAGCGTACGCAGAATTAGAACAAGCTAAGCCTTCAGTAAACAATGATGGAACGGCAGTGGATCGACAGAAAGACATTTCCACTCTGCAAGAAAAGGTGACGTCACTGGAAAAAGAACGAGAAAACTTGGAAGACGATCTGGATGAGAGGGAGGCTGAAATTGATGAACTGAAAAAGAAAATTGAACAACTCGAAACGAACGCCAAAGAGAAAGACGATGAAATTCTGAGTTACAAATCAAAGTTAGACTCTGTCAATGAGGAATTGAAGACGTTGCGGGCGAAAAAGAACGAGGAGAATTCAGAAAAAGCTAAAGACGCCGATGCTGATTTTGACAAAAAAGTCAACGATTACAAATCTGTGGTTGATAAGCTTATGAAAGAGGTTGCATCATTGCAAGGAAAACTTTCTGCAGCAAATCAGAAGAACAAAGAGTTGGAGGAAAAGGTTACATCGAGCACACAGGAGGTCGACGTTCTGCTGACTAAAATCGAAGAATCTTGTGGCAAAACAACAAAGGACAAATTATCCTCTGATGTCGAAAATTTTAAACTGGAAATATTGCGGCTTGAAGGCGAAAACAGAAAGCTGAAGGAACTTGCTAATGACCCGCTGCTTGCATCAACGCAGAAAAAAATGGAAACTTTACAAGCCATGAATAATTTCTTAAAAAGCGAGAAAGAAGAGTTAGTGCTGGAAATTTCCGCCAAAAATAAGAAAATTGAGATTTTGGAGAGGCGCGTGAAAGAGCTGACGGAGATGAGAACGAGCGCTGTGAATGGATCGAAAAACGGAGTGTGCGACGAGGCTGATGCACAGATCAATGAACTGGATGAAGAACTCGGAAAAACCAAACACAGAGTAGCTGAACTCGAGGCCGAACTTGAACACTCTAACAACAGCTTCAACTCCAGACTGAGGAGAGAGTTGGATGAAATAGAGGCAAAGTGGACTAAACGACTCAGGAAAGAGTGCATGGAACTTCAGTCAGAGCTGTCAGAGAAACACAGCAAAGAGAAACAACACTGGCAGAAAAAGGAAGTAGAACTACAGAACATAATTCGTCAAATGAAAATCGTAATGGACAAAAGGCTGGGACAAGCGGAAACTGAACGGCGGAGACTGGAACAAGAACTGATGACGACAAGAACGTCTAGTTTCCATGGCAGCATGATTAGCCTCGACTCCAATTCAGACGATTCAGGGGGAATTCCATCTCCCAATCCAGGGACAAGCGCTGACATCCCTTCGCCGACTGATTGCCTCAGTGATCGCGAGCTAAGGCGTGTTGCATACAAACTAAACGGAGAGGAGTGGTCTCAACTTGGAACTTTCCTAGGGGTGGGGGACAGGGATCTTGTGCAGCTCGGAGGTCTCAGCATGGGGCCCCAGGAGAAAGCTTTTCGATTGCTGTGTGTTTGGAGGACACGCTGTCGACTGAGTCGATCTCAGATGATCTCACAGCTGGCTGTGTCATTGGAGGAAGTGAATCGAAAAGACGTCGCTCAGTTTGTTTTGGAGCAGTTCATGTCTGGAAAACCCAGAAAGAAACTTTTTGGATGGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O02827	Myosin light chain kinase, smooth muscle (Fragment) OS=Ovis aries OX=9940 GN=MYLK PE=2 SV=1
Q28824	Myosin light chain kinase, smooth muscle OS=Bos taurus OX=9913 GN=MYLK PE=1 SV=1
P29294	Myosin light chain kinase, smooth muscle OS=Oryctolagus cuniculus OX=9986 GN=MYLK PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000548 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24342 all species →	SERINE/THREONINE-PROTEIN KINASE 17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0043065 all species →	Biological Process	positive regulation of apoptotic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap9.1048.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.