Gene detail

Detailed information of evm.model.Ap9.1053 in Astrangia poculata

Genomic Location: Ap9:11243171...11263098
NR annotation: CAH3155705.1, unnamed protein product [Porites lobata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap9.1053

atgctctttgttttggtttgtacgcttgtcgtatttccgcgtgttcatggaagtgtggtagggaatgagttgcattttacaagcgatccatctgtaaagaatccagaccgtccacctgtggtagacgatcgtgcaggggttttcacgatgacggcgcgacaggcattgaaagctatcgaagaagtacacaatggcactgtcgactgcaagaccatgctggcggagagaagcttgaaacttctgttctttaaatacgaaaacagcgtttacacagcccaagcaaaccttgccatccgaacagctaatttaatctccgatttgcttccgaccggctccgcgaaggcgtggaatatttccggggaaccggtgttgaagtcgcacgaagaagtcctttacgctatcgtcagaaacaatctagaaaacgacccacttatagtgggatcagcgatcattttcgacaacaacagctttgtaaacaattcattttatgcgccgtatgcgtaccggaactcaaacgactcgtttattaaagtaacagatttatctgcgtcctggagctatcttcacgaggcgtttgtgagactgatgcggaataaatctcacgaccgaccattcccgatacggacaacttacttttatccacggagaaatggctcttatgcaccgcagccactgaaactgacacatgagtttgtggagtccattgacggcttgtggagtaggccctactatgaatgtaccgcggtcagagcatgggtcatcacttacacctctcctatactgggcaactgggacaagaatggaccaatctccttcatgggcatgaccacaattgatattgcactcacgaatgtggacattaaccaatgtgacaaggaatctgggggccagttccagttcgaaattttcgccggcactcatcgctgtaaaaatgaaaccacgcagtgcgagtttgtgagtggactgggttttagagcaggttcgtacaggtgcgcctgtaagcctggctacttctttcccaacgtcacaactcatgataaatatttcaacggctccgtcatcgaggcggcggccgctgaccagagtaacagctatcactcgaacccagattcctatcaatgcatccagtgccagcctggttgtgacaagtgcgtggatgattcgccttgtattgtgacgttgagctggccgctaaggaaagcgctgatggggttgactgttgtcaccattctagctgccattgggataattgtatttattgtatactttcgagatttgaaggtggtgaagacagcaagtcctcattttctaatcatcatattagcgggatgtatcttgcagtactgtgagattcttgtggagtaccccgagccgcagaactcattatgtatcgttcggctgtggttccgccatattggatttgggcttggtttcacttctcttctccttaaaacatggaggatttccgtgattttccgcgtgaaatctgctcagaagatcaaactcactgaccgccatcttctccagcgcctcgctcccataatggcgttgtacatagtctatttgctggcctggtcactagcgggacccagtcacgtgatagagttgaagatgccaggagatctcaagttcgacgagtgttctatcgactggtgggatcacgcaatcttgatttttgaaatattattcctgttctggggaattcacttgtgttataacgtcaggaaagcgccgtccgccttcaacgagagcaagttcatcagctggtctatctacaatttgacagtggtgacgtttttcctcaagatcacaagacttttcattggggatctcgcaggacctgatatgatttacctgctggagttctttagagtacagctcagcgtgtctgttctcctggggcttgtattcgtccccaagatcgttcgtgtgatcaaggggcgtggggacgtctttgatacaagtggtcggattgcgtctgtaaaaggagctgctcttaatatgccagtggcctcctcagaaggcacagtgaacttgagtgctgaaaacgaggatcttaaggaagagatacgtaaactatacggtcagctacagcaaatgaaaaccgcgaacatggaggcgggaaatagacatctggggcgttctgcttctgttctgtttggtggctctactccctcactcttaaactctacccccaataacaacggaagcttggcttgtttggttaaccctggaaaagaaaagcgacatcaaagacactcgcctgcggctgaacttgtgagcgactttgtttga

Transcript

evm.model.Ap9.1053

ATGCTCTTTGTTTTGGTTTGTACGCTTGTCGTATTTCCGCGTGTTCATGGAAGTGTGGTAGGGAATGAGTTGCATTTTACAAGCGATCCATCTGTAAAGAATCCAGACCGTCCACCTGTGGTAGACGATCGTGCAGGGGTTTTCACGATGACGGCGCGACAGGCATTGAAAGCTATCGAAGAAGTACACAATGGCACTGTCGACTGCAAGACCATGCTGGCGGAGAGAAGCTTGAAACTTCTGTTCTTTAAATACGAAAACAGCGTTTACACAGCCCAAGCAAACCTTGCCATCCGAACAGCTAATTTAATCTCCGATTTGCTTCCGACCGGCTCCGCGAAGGCGTGGAATATTTCCGGGGAACCGGTGTTGAAGTCGCACGAAGAAGTCCTTTACGCTATCGTCAGAAACAATCTAGAAAACGACCCACTTATAGTGGGATCAGCGATCATTTTCGACAACAACAGCTTTGTAAACAATTCATTTTATGCGCCGTATGCGTACCGGAACTCAAACGACTCGTTTATTAAAGTAACAGATTTATCTGCGTCCTGGAGCTATCTTCACGAGGCGTTTGTGAGACTGATGCGGAATAAATCTCACGACCGACCATTCCCGATACGGACAACTTACTTTTATCCACGGAGAAATGGCTCTTATGCACCGCAGCCACTGAAACTGACACATGAGTTTGTGGAGTCCATTGACGGCTTGTGGAGTAGGCCCTACTATGAATGTACCGCGGTCAGAGCATGGGTCATCACTTACACCTCTCCTATACTGGGCAACTGGGACAAGAATGGACCAATCTCCTTCATGGGCATGACCACAATTGATATTGCACTCACGAATGTGGACATTAACCAATGTGACAAGGAATCTGGGGGCCAGTTCCAGTTCGAAATTTTCGCCGGCACTCATCGCTGTAAAAATGAAACCACGCAGTGCGAGTTTGTGAGTGGACTGGGTTTTAGAGCAGGTTCGTACAGGTGCGCCTGTAAGCCTGGCTACTTCTTTCCCAACGTCACAACTCATGATAAATATTTCAACGGCTCCGTCATCGAGGCGGCGGCCGCTGACCAGAGTAACAGCTATCACTCGAACCCAGATTCCTATCAATGCATCCAGTGCCAGCCTGGTTGTGACAAGTGCGTGGATGATTCGCCTTGTATTGTGACGTTGAGCTGGCCGCTAAGGAAAGCGCTGATGGGGTTGACTGTTGTCACCATTCTAGCTGCCATTGGGATAATTGTATTTATTGTATACTTTCGAGATTTGAAGGTGGTGAAGACAGCAAGTCCTCATTTTCTAATCATCATATTAGCGGGATGTATCTTGCAGTACTGTGAGATTCTTGTGGAGTACCCCGAGCCGCAGAACTCATTATGTATCGTTCGGCTGTGGTTCCGCCATATTGGATTTGGGCTTGGTTTCACTTCTCTTCTCCTTAAAACATGGAGGATTTCCGTGATTTTCCGCGTGAAATCTGCTCAGAAGATCAAACTCACTGACCGCCATCTTCTCCAGCGCCTCGCTCCCATAATGGCGTTGTACATAGTCTATTTGCTGGCCTGGTCACTAGCGGGACCCAGTCACGTGATAGAGTTGAAGATGCCAGGAGATCTCAAGTTCGACGAGTGTTCTATCGACTGGTGGGATCACGCAATCTTGATTTTTGAAATATTATTCCTGTTCTGGGGAATTCACTTGTGTTATAACGTCAGGAAAGCGCCGTCCGCCTTCAACGAGAGCAAGTTCATCAGCTGGTCTATCTACAATTTGACAGTGGTGACGTTTTTCCTCAAGATCACAAGACTTTTCATTGGGGATCTCGCAGGACCTGATATGATTTACCTGCTGGAGTTCTTTAGAGTACAGCTCAGCGTGTCTGTTCTCCTGGGGCTTGTATTCGTCCCCAAGATCGTTCGTGTGATCAAGGGGCGTGGGGACGTCTTTGATACAAGTGGTCGGATTGCGTCTGTAAAAGGAGCTGCTCTTAATATGCCAGTGGCCTCCTCAGAAGGCACAGTGAACTTGAGTGCTGAAAACGAGGATCTTAAGGAAGAGATACGTAAACTATACGGTCAGCTACAGCAAATGAAAACCGCGAACATGGAGGCGGGAAATAGACATCTGGGGCGTTCTGCTTCTGTTCTGTTTGGTGGCTCTACTCCCTCACTCTTAAACTCTACCCCCAATAACAACGGAAGCTTGGCTTGTTTGGTTAACCCTGGAAAAGAAAAGCGACATCAAAGACACTCGCCTGCGGCTGAACTTGTGAGCGACTTTGTTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VKA4	Probable G-protein coupled receptor CG31760 OS=Drosophila melanogaster OX=7227 GN=CG31760 PE=1 SV=3
Q8C419	Metabotropic glycine receptor OS=Mus musculus OX=10090 GN=Gpr158 PE=1 SV=2
D4A6L0	Metabotropic glycine receptor OS=Rattus norvegicus OX=10116 GN=Gpr158 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001303 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00003 all species →	7tm_3	7 transmembrane sweet-taste receptor of 3 GCPR	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017978 all species →	Domain	GPCR family 3, C-terminal	Interproscan
IPR000337 all species →	Family	GPCR, family 3	Interproscan
IPR043458 all species →	Family	G-protein coupled receptor 158/179	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32546 all species →	G-PROTEIN COUPLED RECEPTOR 158-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap9.1053.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.