Detailed information of evm.model.Ap9.1125 in Astrangia poculata

Genomic Location: Ap9:11872085...11878781
NR annotation: XP_020611665.1, putative peptidyl-tRNA hydrolase PTRHD1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZ85Putative peptidyl-tRNA hydrolase PTRHD1 OS=Bos taurus OX=9913 GN=PTRHD1 PE=2 SV=2
D3Z4S3Putative peptidyl-tRNA hydrolase PTRHD1 OS=Mus musculus OX=10090 GN=Ptrhd1 PE=1 SV=1
Q6GMV3Putative peptidyl-tRNA hydrolase PTRHD1 OS=Homo sapiens OX=9606 GN=PTRHD1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008369 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01981
all species →		PTH2Peptidyl-tRNA hydrolase PTH2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023476
all species →		Homologous_superfamilyPeptidyl-tRNA hydrolase II domain superfamilyInterproscan
IPR002833
all species →		FamilyPeptidyl-tRNA hydrolase, PTH2Interproscan
IPR042237
all species →		FamilyPutative peptidyl-tRNA hydrolase PTRHD1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46194
all species →		PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004045
all species →		Molecular Functionaminoacyl-tRNA hydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05969PTRHD1; peptidyl-tRNA hydrolase PTRHD1EC:3.1.1.29
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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