Detailed information of evm.model.Ap9.1201 in Astrangia poculata

Genomic Location: Ap9:12973125...13007836
NR annotation: XP_027052242.1, uncharacterized protein LOC113679481 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O35474EGF-like repeat and discoidin I-like domain-containing protein 3 OS=Mus musculus OX=10090 GN=Edil3 PE=1 SV=2
P21783Neurogenic locus notch homolog protein 1 OS=Xenopus laevis OX=8355 GN=notch1 PE=1 SV=3
O43854EGF-like repeat and discoidin I-like domain-containing protein 3 OS=Homo sapiens OX=9606 GN=EDIL3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000579 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF07974
all species →		EGF_2EGF-like domainDomainInterproscan
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR013111
all species →		DomainEGF-like domain, extracellularInterproscan
IPR051022
all species →		FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049
all species →		CRUMBS FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007157
all species →		Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991
all species →		Cellular Componentprotein-containing complexInterproscan
GO:0045197
all species →		Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap9.1201.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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