Genomic Location: Ap9:13378662...13381760
NR annotation: KAJ7384845.1, Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap9.1239 |
| Transcript |
| evm.model.Ap9.1239 |
| Protein |
| evm.model.Ap9.1239 |
| UniProt accession | Description |
|---|---|
| O94766 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Homo sapiens OX=9606 GN=B3GAT3 PE=1 SV=2 |
| P58158 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Mus musculus OX=10090 GN=B3gat3 PE=1 SV=1 |
| Q9WU47 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Cricetulus griseus OX=10029 GN=B3GAT3 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001365 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03360 all species → | Glyco_transf_43 | Glycosyltransferase family 43 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005027 all species → | Family | Glycosyl transferase, family 43 | Interproscan |
| IPR029044 all species → | Homologous_superfamily | Nucleotide-diphospho-sugar transferases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10896 all species → | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000139 all species → | Cellular Component | Golgi membrane | Interproscan |
| GO:0005975 all species → | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0015018 all species → | Molecular Function | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0050650 all species → | Biological Process | chondroitin sulfate proteoglycan biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10158 | B3GAT3; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 | EC:2.4.1.135 | Glycosyltransferases | ko01003 | deepkoala |
Transcript abundance of evm.model.Ap9.1239 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
