Detailed information of evm.model.Ap9.1419 in Astrangia poculata

Genomic Location: Ap9:15246722...15255210
NR annotation: XP_020621039.1, uncharacterized protein LOC110058723 isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000294 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04103
all species →		CD20CD20-like familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030417
all species →		FamilyMembrane-spanning 4-domains subfamily AInterproscan
IPR007237
all species →		FamilyCD20-like familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23320
all species →		MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22190MS4A3S; membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP